Candidatus Nitrosocosmicus franklandianus: NFRAN_2281
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Entry
NFRAN_2281 CDS
T05935
Name
(GenBank) Cell division cycle protein 48 homolog AF_1297
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nfn
Candidatus Nitrosocosmicus franklandianus
Pathway
nfn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
NFRAN_2281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfn03019
]
NFRAN_2281
03009 Ribosome biogenesis [BR:
nfn03009
]
NFRAN_2281
04131 Membrane trafficking [BR:
nfn04131
]
NFRAN_2281
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfn04147
]
NFRAN_2281
Messenger RNA biogenesis [BR:
nfn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
NFRAN_2281
Ribosome biogenesis [BR:
nfn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
NFRAN_2281
Membrane trafficking [BR:
nfn04131
]
SNARE
SNARE associated proteins
Others
NFRAN_2281
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NFRAN_2281
Exosome [BR:
nfn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NFRAN_2281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
TIP49
AAA_14
AAA_22
AAA_33
AAA_lid_PRS2_C
nSTAND3
NPHP3_N
AAA_7
RNA_helicase
Mg_chelatase
DUF815
AAA_28
AAA_24
AAA_18
Zeta_toxin
IstB_IS21
Sigma54_activat
TsaE
AAA_3
Parvo_NS1
NB-ARC
Vps4_C
AAA_11
SLFN-g3_helicase
AAA_30
ABC_tran
PhoH
DUF5906
ResIII
NTPase_1
bpMoxR
NACHT
KAP_NTPase
Zot
UFD1_N2
Motif
Other DBs
NCBI-ProteinID:
VFJ14603
UniProt:
A0A484IA27
LinkDB
All DBs
Position
NFRAN:complement(2015663..2017900)
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AA seq
745 aa
AA seq
DB search
MTANSNNDNKSVKNYTLKVAEAEQRDVGRKIARVDPAIAESLNIISGDALEISSLGRKTT
VLSWPAKESDRGKGLIRIDGLIRNRLDVGINDLVEIRVVESKTAIDITFAPTEPLRIIGA
EEYLAEYLNGTLMTKGDTIPISVMGRRIDLVVISTHPSGPVIISDATRILVSEETSKALQ
ISQEGGTASITYEDIGGLGDAVARVREMIELPLRHPELFKRLGVEAPKGVLLHGPPGTGK
TLLAKAVANETNSNFFTIGGPEIMSKYHGESEERLRNVFKEAEKNAPSIIFIDEIDSIAP
KREEVTGEVERRIVAQLLSLMDGMTSRGKVVVIAATNRINAIDPALRRPGRFDREIEIGV
PNRDGRLEVLQIHTRGMPLDKDVDLQKLADISHGFVGADLQALAKEAAMRALRRVLPDIN
LSSESIPLETLRKIIVRMQDFMDVIKETEPSAMREVFVEVPDIKWEDIGGLSSIKQELQE
AVEWPLKYQNVFTYADATPPKGILLYGPPGTGKTLMAKAAANESEANFISIKGPELLSKW
VGESEKGIREVFRKARQAAPCIIFFDELDAIAPTRGGDHGDSHVTERVISQFLTEMDGLE
ILTNVVVIAATNRPDIIDPALLRPGRFDRILYVPPPDRDSRLQILKIHTKKKPLADDVNL
ENLADKTDGYTGADIASLSSAAVMLALREHITKYPDSKEAEKHVNDLKIGMKHFEEAMKK
IRPLSKQELDMYKNVARQFGKVEDI
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaaattctaataacgacaataaatcggtaaaaaattataccttaaaagtagct
gaagcagagcagcgagacgttggtaggaaaatagctcgagttgatcctgctatagcagaa
tctcttaacataattagcggtgatgctttagaaatatcttctctgggtagaaaaactacc
gtattaagctggccagcaaaagaaagtgacagaggtaagggcttgattcgtattgacggt
cttattcgaaatcgattagatgtaggtatcaatgatttggtagaaattagagttgtcgaa
tcaaaaacagctattgatattacatttgcacccacagagccgttaagaatcataggtgcc
gaggaatatctagcagaatatctaaatggaacacttatgacaaaaggagataccattcct
attagtgtaatgggtagaaggatagatttggttgtaatttcaacacatccttctggccca
gtaataataagtgatgcaacacgcatactagtttcggaagagacctcaaaagctcttcaa
atctcacaagaaggaggtaccgcttccatcacctatgaagacattggaggtttaggcgat
gcagtagcaagagtcagagaaatgatagagcttccactcagacatcccgagttatttaaa
agactaggagtagaagcccccaagggagttttattacatggtcccccaggtactggaaaa
actcttttagcaaaagcggttgctaatgagaccaattcaaatttctttacgattggagga
cctgaaataatgagcaaatatcatggtgaatctgaagagagattgcggaatgtatttaaa
gaggctgagaagaacgcaccatcaatcattttcattgatgaaatagattctattgcacca
aagcgtgaagaagtaactggagaagttgagagaagaatagttgcccaactactttcattg
atggatggcatgacatctagaggtaaagtagtagttatagcagcaacaaacaggataaac
gccattgatccagccttaagaagacctggaagattcgacagagaaatagaaataggagtt
cctaacagagatggaagactagaagttctgcaaattcatacacgtggtatgccactagat
aaagacgtcgatttacaaaaattagcagatatttcccatggctttgttggagcagacctt
caagctttggcaaaagaggctgcaatgcgagcactgagaagagttcttcccgacataaat
ctttcgagcgaaagcatccctcttgaaaccttaaggaaaatcatagtaaggatgcaagac
tttatggatgtaatcaaagagacagaaccttcagcaatgcgagaagtatttgttgaagtt
cccgatataaaatgggaagatattggtggcttgtcttcaatcaaacaagagcttcaggaa
gcagtagaatggccattaaagtatcagaatgtttttacttatgcagacgccacgccacca
aaagggatactattgtacggacctccaggtactggaaaaacattaatggcaaaggcagca
gcaaatgaaagtgaagctaattttattagtatcaagggaccagaattattatccaagtgg
gtcggagagtctgaaaaagggataagggaagttttcagaaaagcaagacaagctgcaccc
tgtataatattctttgatgaacttgatgccattgcaccaacaagaggtggggatcacgga
gattcgcatgttactgaaagagttattagtcaatttttaaccgagatggatggtttggag
atattaactaatgtggttgtaattgccgctacaaatcgacccgatataatagaccccgct
ttgctaagacccggaaggtttgacaggattttgtacgtcccgcctccagatagagattct
aggctccaaatactcaaaattcatactaagaaaaaaccattagctgatgatgttaattta
gaaaatttggcagataaaactgatggatacacaggagcagatattgcttcgttgtcttca
gctgcagttatgttagcgttgagagaacatattaccaagtacccagattcaaaggaagcg
gaaaagcatgttaacgatttgaaaataggcatgaaacattttgaggaagcgatgaaaaaa
attagacccctatcaaagcaggaattggatatgtacaagaacgttgcacgtcaattcgga
aaagtagaagacatttga
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