Candidatus Nitrosocosmicus franklandianus: NFRAN_2735
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Entry
NFRAN_2735 CDS
T05935
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
nfn
Candidatus Nitrosocosmicus franklandianus
Pathway
nfn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NFRAN_2735 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfn03021
]
NFRAN_2735 (rpoB)
Enzymes [BR:
nfn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NFRAN_2735 (rpoB)
Transcription machinery [BR:
nfn03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NFRAN_2735 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
FtrD-like
FYVE
Motif
Other DBs
NCBI-ProteinID:
VFJ15058
UniProt:
A0A484IE93
LinkDB
All DBs
Position
NFRAN:2419782..2423144
Genome browser
AA seq
1120 aa
AA seq
DB search
MTVSTTNNSIDMWPIINDILRREGVARQHLNSYNEFIERGLQSIIDEVNEIEIETAEYPY
KIKLGKIKMQQPRIMELDGSITHVAPVEARLRNLTYASPIMLECSIVEEGKTLESRFIHI
GDMPVMVKSNACMLHNYSEVKLVDVGEDPKDPGGYFIINGSERVIVGLEDLSYNKIIVDI
EETSGTMLYKAKVYSSIVGYRAKLELIMRPDGSIVSKIPGSPVDIPLIILIRALGLESDK
DIANSVSLNEAIQDELEPSFEKSGEVTTSRDAIIYISKRIAPGMLEEFQIKRAETLLDWG
LLPHLGKNPDNRYEKALFLGESACKLIELNLNWIEPDDKDHYGNKVIKFAGQMLADLFRT
AFRNLIRDMKYQLERSGQKRGINAVAAAVRPGIISDKLNNAIATGNWGRGRVGVTQLLDR
TNYMSTVSHLRRIQSPLSRSQPNFEARDLHATHFGRICPSETPEGSNCGLVKNLALSAVI
SVSVLSSDVIEKLYELGVQNVNEANDELKQKGARIFVDGRLIGYIEDGGSLANRLRSMRR
SGRMHPHMGIYYYSSMNDNATKRLYISCNSGRVLRPLAIVKDGNILLTKEIIDKISKKFL
SWTDLLYMGIIELVDANEEENCYIASELKNITNDHTHVEIYLSSILGVGASIIPYPEHNQ
SPRNTYESAMAKQSLGFSTPLMNASTYVRQHFMLYPQMPVVTTKAINLLGLDERPTGQNC
VVAVLPFEGYNIEDAVVFSKSAVDRGLARTFFYRVYEAEAKQYPGGMKDTFEIPSSEANI
RGYRGEKSYRLLEQDGAIMHESVVNGGDILIGRTSPPRFMEEYKEFEVKGPYRRDTSIGV
RPSENGVVDTVIMTQSVEGGKMYKIRVRDMRIPEIGDKFASRHGQKGVVGMLVNQEDLPY
TEDGVVPDVMINPHAFPSRMTVGMFMESLGGKAASLRGKVVDGSAFLGEKLNDIKDIMGS
YGFKHSGKEIMYDGRTGKKFPMDVYIGVVYYQKLHHMVADKIHSRARGQVQMLTKQPTEG
RARGGGLRFGEMERDCLIAYGASMMLKDRLLEESDKAEINVCERCGLLSYFDTKQRKYVC
RVCGDKAKISNVVIAYAFKLLLQEMMSLNVAPRLLVKEKV
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaagtactactaataattctattgatatgtggccaatcataaatgatatattg
cgcagagaaggggtagcgaggcaacatctcaattcttataatgagttcatcgaacgaggg
cttcagagtataatagatgaagttaatgaaattgagatagagactgctgaatatccgtat
aaaataaagttaggaaagataaaaatgcagcaacctcgtattatggaattagatggatcc
atcactcatgttgcaccagtcgaagctagacttagaaatttaacctatgcttcgcctata
atgttggaatgtagtatagttgaagaaggtaagactttggaatctcggtttatacatatt
ggagatatgcccgtgatggttaaatcaaatgcatgtatgttgcataattattccgaagta
aagttggttgatgtcggagaagatccaaaggatccaggtggttatttcattattaatggc
tcggaaagagtaatcgtcgggctagaagatctctcttacaacaaaataattgtagatatc
gaagaaacttctggcactatgctctataaggccaaggtttattcctccatagttggctac
agagccaaattagaattaattatgaggccagatggttccatagtttctaaaatccctggc
tctcctgtcgatattccacttattattttaatcagagccttaggattagaatcggataaa
gacatagcaaattcagtatcacttaatgaagcaattcaagatgagttagaaccatctttt
gaaaagtcaggtgaagtaacaacaagcagagacgctattatttacataagcaagagaatt
gctccaggcatgttagaggaatttcaaattaagagagctgaaaccttgcttgattgggga
ttattgccacatttggggaaaaatccggacaaccgttatgaaaaggccttattcttgggt
gaatcagcatgcaagttgattgagttgaatctcaattggatagagcctgacgacaaagat
cattacgggaataaagtcattaaatttgccggtcaaatgttggctgatttatttagaaca
gcatttagaaatttgattcgagatatgaagtatcaactagagagatctggccagaaacgc
ggcataaatgctgttgctgccgcggtaagacctggaataatttcagacaaattgaataat
gctattgcaacggggaactggggaaggggaagagttggagttactcagttattggataga
actaattatatgtcaacagttagccatctccgacgtatacaatcacctcttagcagaagc
caacctaattttgaggcacgggatcttcatgcgacacattttgggcgaatatgcccttcc
gaaactcctgaaggctctaattgtggactagtaaagaacctagcattatctgcagtaatt
tctgtgagcgttttgtcctcagatgtgatagaaaagctatatgaattgggtgttcaaaac
gtaaacgaagcaaatgatgaattaaaacaaaaaggagctcgaatttttgtagatggtcgc
ttgattggatatatagaagatggaggctcactggctaatagactacgaagcatgagaaga
tctggacgaatgcatcctcatatgggaatatattactactcttcaatgaatgataatgca
acaaagagattatacataagttgcaattcaggtagagtgctacgacctcttgcaattgtt
aaggatggaaacatacttcttaccaaagagatcatagacaaaatctctaaaaagttcttg
tcatggactgatttactttatatgggtatcatagaactagttgatgcaaatgaagaagag
aattgttatattgccagtgaactgaaaaatatcactaatgatcatacccatgtagaaatt
tacttatcttctatactaggtgtgggggcttcaatcattccttatcctgaacacaatcag
tcacctcgaaatacttacgagagcgctatggctaaacaaagtcttggattctccacgcct
ctgatgaacgcaagcacatacgtgcgacagcactttatgctttatccacagatgcccgtt
gttaccactaaggcaataaatcttttaggcctcgacgaaagacccaccggccagaactgt
gtagttgccgtccttccgtttgaaggttataatattgaagatgcagtagtgtttagcaag
tccgcagttgatagaggattggctcgtacctttttttaccgtgtctatgaagcagaagca
aagcaatatccaggaggaatgaaagacacttttgagataccctcgtcggaagctaatatt
cgtggttacagaggtgaaaaatcttatcgattgctcgagcaggatggcgctatcatgcac
gaatcagtagttaacgggggtgatatactgatcggtagaacatcacctccaagatttatg
gaagaatataaggaatttgaagtaaaggggccatatagaagagatacttccatcggtgtt
agaccttctgagaacggggttgttgacactgtcataatgactcagtccgtggagggcgga
aaaatgtacaagattagggtgagagacatgcgaatcccagagatcggtgataagtttgct
tcacgtcatggacaaaaaggagtagtgggtatgttggtgaatcaggaagacctaccatat
acagaggatggggtggttccagacgtcatgattaatccacatgcattcccctctaggatg
actgttggtatgttcatggaatctcttggaggaaaagctgcatctcttaggggtaaggta
gtcgatggttctgcatttttaggtgagaaattgaatgatattaaggatataatggggagc
tatggattcaagcatagcggtaaggaaataatgtatgatggtagaactggcaagaaattt
cctatggatgtgtatattggggttgtttactatcaaaaacttcaccatatggttgcagac
aagatccatagtagagcaaggggacaagtacagatgctgaccaaacagcctactgaaggc
agagccagagggggtgggctaagatttggtgaaatggaaagagattgcctcattgcatat
ggtgcatccatgatgttaaaagatagattgttagaggaatcagacaaggctgaaattaat
gtgtgtgagcgatgtggcttattatcatattttgatactaaacaaagaaaatatgtctgt
agggtttgtggagataaagccaagatttcaaatgtagtcattgcatacgctttcaaattg
ttgttacaagaaatgatgagtttaaatgtggctcctcgcttattggtaaaggagaaggtt
tga
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integrated database retrieval system
