Candidatus Nitrosocosmicus franklandianus: NFRAN_2944
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Entry
NFRAN_2944 CDS
T05935
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nfn
Candidatus Nitrosocosmicus franklandianus
Pathway
nfn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NFRAN_2944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfn03021
]
NFRAN_2944
Transcription machinery [BR:
nfn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NFRAN_2944
Prokaryotic type
Archaeal type
TFB
NFRAN_2944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Trm112p
Zn_ribbon_tTFIIB
DUF6671
RB_B
Lar_restr_allev
Cas12f1-like_TNB
Cyclin_C
Motif
Other DBs
NCBI-ProteinID:
VFJ15267
UniProt:
A0A484IEM5
LinkDB
All DBs
Position
NFRAN:2605816..2606829
Genome browser
AA seq
337 aa
AA seq
DB search
MIFIIETIKCVSHIIYKTRNVEEKIKMSQKLMNSYSSTLCPLCNKPTNIITDQESGELIC
TACGTVIVDQNRQENLGWMNSNTEEINFRSRTGAPTSLAKYDRGLSTVIGKIDRDASGRQ
IDVSMRSRIGRWRTWDARTQTNDSSKRNLQTAFVHLYMVKDALGLPEHAIEKVAYLYRKI
QERKLIKGRTIKGALAVASYIACREMGIPRSLREISKIMNLKEKEVARIYRKVMVELDLK
IPQVDAVKEIIKISNMCSVSEKSKRVAIRILISVMKTSSSVGKNPMGLAGASLYLACKEN
GEELTQSKIAEVAGVTEVTLRHDLDLLLDLPELKVRN
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgattttcataatagaaacgataaaatgtgtgtctcacattatatataagactcgaaat
gtggaggaaaaaatcaaaatgagtcaaaaattaatgaattcatattcatcaaccttatgc
ccattatgtaataaaccgactaatataattaccgatcaagagtcaggcgaactaatatgc
actgcatgtggaaccgttatagttgatcaaaatcgccaagaaaatctcggatggatgaat
tctaatactgaggaaataaatttcagatcaaggactggagctcctacttcattagcaaaa
tatgatcgtggtttatcaacggtcattggcaagattgatagggatgcatcaggacgacag
attgacgtatccatgcgaagcaggattggacgatggagaacatgggatgcacgaacccaa
acaaatgattcttcaaaaagaaatctacagacagcttttgtccatctatatatggtgaaa
gacgcgcttggtcttcctgaacatgcaattgagaaggtagcatacctttatcgaaaaatt
caggaaagaaaactaatcaaaggaaggacaataaaaggtgctcttgccgtagcttcatac
attgcttgcagagaaatgggaattccaagaagcttacgagagatatcaaaaatcatgaat
ttaaaagaaaaagaggtcgcaaggatctatcgaaaagtaatggtagaattagatctaaag
atacctcaggtggacgcggtcaaagaaatcatcaaaataagtaacatgtgctctgtatcg
gaaaaatcgaagagagtagccataagaattttgatcagtgttatgaaaacatcatcttct
gtaggaaagaatcctatgggcttagctggtgcttcattgtatctcgcttgcaaagaaaac
ggtgaagaactcacacagtcaaaaattgctgaagttgcaggagtgactgaagtgacatta
agacatgatttagatctactattggacctaccagagcttaaggtaagaaattaa
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