Candidatus Nitrosocosmicus franklandianus: NFRAN_2995
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Entry
NFRAN_2995 CDS
T05935
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nfn
Candidatus Nitrosocosmicus franklandianus
Pathway
nfn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NFRAN_2995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfn03021
]
NFRAN_2995
Transcription machinery [BR:
nfn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NFRAN_2995
Prokaryotic type
Archaeal type
TFB
NFRAN_2995
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_10
A2L_zn_ribbon
RH_dom
Motif
Other DBs
NCBI-ProteinID:
VFJ15318
UniProt:
A0A484IEX9
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All DBs
Position
NFRAN:complement(2654334..2655254)
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AA seq
306 aa
AA seq
DB search
MHPEGKVEKSKPLVCEFCKSDSVIFDNVSFEYVCSACGCVSSQDPNSDSMTSFRVNSAYN
DRTRTGMPESLAIHNKGLSTLIGIGDTDARGKALEPSQKNSIQRLRTWNNRAQLNDSVSR
NLEKALKLLNNFGDKLYLSQAVVEGAAYIYRKAAIKKLAKGRSTLGLVGAALYAACRETA
TPKTITDIATACNITTKDIMSHYKLILKELSLQMPVLHGPDYVTLICNRLQLSEKTKREA
LRIYSMVQQNRISIGKNPRALAGSIIYLASQNCNEFLRQVEICQVAEISTVSLRKRCKEI
KSKINL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcatccagaaggcaaggtagaaaaatcaaagccattagtgtgtgagttttgtaagagt
gattcagttatttttgataatgtatcttttgaatacgtatgttcagcttgtgggtgtgtt
tcaagtcaagatccgaattctgattcaatgactagttttagggtcaattcagcttataat
gatcggacaaggacagggatgcccgagtctttagctatacataacaagggattatccact
ttgatcgggattggagacacagacgccaggggcaaagccttggagccatctcagaaaaac
agtatacaaagattacgaacatggaataatcgagcacaacttaacgattctgtttcccga
aatttagaaaaggctcttaagttgctgaataactttggggataaattatacctcagtcaa
gccgtagtggaaggagcagcatatatttaccgaaaggctgcgataaaaaagttggcaaaa
ggtcgatcgactctaggtttagtgggagcagcgttgtatgcggcatgtagagaaaccgct
actcctaaaaccataacagatattgcgaccgcctgtaatatcactaccaaagatataatg
tctcattataaattgatactgaaagaactttcattgcaaatgcccgtattacacggtcca
gattatgtaaccctcatatgtaacaggttacaattaagtgaaaagacgaagagagaggca
ttacgaatatattcaatggtacaacaaaacaggatctcaattgggaaaaatccaagggcc
ttggccggatctataatatacttggcctcacaaaattgtaatgaatttttgagacaggta
gaaatttgccaagttgcagaaatttccactgtttcattgagaaaaagatgcaaagagata
aaatctaaaataaacctctaa
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