Candidatus Nitrosocosmicus franklandianus: NFRAN_3000
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Entry
NFRAN_3000 CDS
T05935
Name
(GenBank) putative 3-methyladenine DNA glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
nfn
Candidatus Nitrosocosmicus franklandianus
Pathway
nfn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NFRAN_3000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfn03400
]
NFRAN_3000
Enzymes [BR:
nfn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NFRAN_3000
DNA repair and recombination proteins [BR:
nfn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NFRAN_3000
Prokaryotic type
NFRAN_3000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
VFJ15323
UniProt:
A0A484IC20
LinkDB
All DBs
Position
NFRAN:complement(2659251..2659892)
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AA seq
213 aa
AA seq
DB search
MRLGRTFFENETHLVAQSLIGKLIVRYVSFYGNYYRLSGLITETEAYGYLNDPASHAFKG
ETMRNRPMFGQVGKAYVYFIYGNHYCLNVVAKAQNDHAGAVLIRSIEPIDGIGLMKIFRN
TEEISKLTTGPGRLAQALRITRKHNNLDLADMNNKILYIEDNRCPKIGKDFILESSERIG
ISLANEIQWRYIMLVRNSSYDGFVPSSFISKQS
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
ttgaggttaggaagaactttttttgaaaacgaaactcacttggtggcccaatctttaata
ggtaagttgattgttagatacgtaagtttttatggaaattattatagattaagtggatta
atcacagaaactgaagcgtatggatacctgaatgacccagctagtcatgcattcaaggga
gaaactatgagaaatcgaccaatgttcggtcaagtaggaaaagcttatgtatattttatc
tatggtaatcattactgtttaaatgtagtagctaaagcccaaaatgatcacgctggagct
gtcctgataagatcaattgaacccatagacggaattggcttgatgaagatttttagaaat
acagaagagatttcaaaacttactacaggtccgggtagattagcacaagctttgaggatt
acaagaaaacacaataatttggatcttgctgatatgaacaataagatattatacatcgaa
gacaataggtgcccaaagattggcaaagattttatcttagaaagctccgagagaattggt
atttctttggcaaatgaaatacaatggaggtatataatgctggtgaggaattcttcatat
gacggatttgtgcctagctcatttatttcgaagcaaagctaa
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