Candidatus Nitrosocosmicus franklandus: NFRAN_3010
Help
Entry
NFRAN_3010 CDS
T05935
Symbol
tfb
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nfn
Candidatus Nitrosocosmicus franklandus
Pathway
nfn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NFRAN_3010 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfn03021
]
NFRAN_3010 (tfb)
Transcription machinery [BR:
nfn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NFRAN_3010 (tfb)
Prokaryotic type
Archaeal type
TFB
NFRAN_3010 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Auto_anti-p27
Cyclin_C
Sigma70_r4
HTH_Tnp_ISL3
Zn_ribbon_tTFIIB
Cyclin_N
zf-CCHC_5
HTH_3
HTH_AsnC-type
Zn_Ribbon_1
Lar_restr_allev
HEF_HK
LacI
Trm112p
Ribosomal_S27
Motif
Other DBs
NCBI-ProteinID:
VFJ15333
UniProt:
A0A484IC31
LinkDB
All DBs
Position
NFRAN:complement(2668312..2669226)
Genome browser
AA seq
304 aa
AA seq
DB search
MVKDISMFGDRCPRCGKGPMVTDNSTGEMFCGNCGFVVTERIEETGPEWRAFSKEEHEDR
SRAGVPTSLAMHDMGLATIIGPVDKDASGKPLSASMKSTIERLRTWDSRSQVHEPVDRNF
RQAFSELDRLKDKLAVGDAVIEKAAYVYRKALEKGLVRGRSISALVAAALYAACRDTETP
RTLKDVANASNIKKKDVARCYRLLIRELDLKMPVVDPVKCVARIASKAGLTEKTKRKALE
ILKKAEEGKISAGKDPMGLAAAALYVACVMNGENKTQKDVAEAAGVTEVTIRNRYKGLKT
HLKL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaagatatttctatgtttggtgatcgatgtccaagatgcggcaaaggtcctatg
gttacagataattcaaccggagaaatgttctgcggtaattgtggttttgtagtaacagag
agaattgaggaaactggaccggaatggagggccttctcaaaagaagagcatgaggatcgt
agcagagctggagtacctacatctttagccatgcatgatatgggcctcgctactattatt
ggaccagtagataaggacgcctcggggaaaccgctctctgcgtccatgaagagtacaatc
gaaagactaaggacttgggacagtaggagtcaagttcatgaaccagttgacagaaacttt
agacaggcatttagtgaacttgatagattaaaagataagctagcagtcggtgatgcggta
atagagaaggctgcttatgtttatcgaaaggccctagaaaaggggttagttaggggaaga
tcaatttcagcgctggttgcagctgctctttatgcagcatgtcgagacactgaaacacca
agaactttgaaggatgttgctaatgctagcaacatcaagaagaaagacgttgcgagatgt
tatagattgctaataagagaattggatctcaaaatgccagttgtggatccagtaaaatgt
gttgcaagaattgctagcaaggcaggactcactgaaaaaacaaaaagaaaggctttagaa
attctaaagaaagccgaggaaggcaaaatttctgctggaaaggatccgatggggcttgca
gctgcagccttgtatgtagcctgtgtcatgaacggagagaacaaaacacagaaagatgta
gccgaagctgccggagttacagaggtcactattagaaatagatacaaaggtctcaaaact
catctaaaactttaa
DBGET
integrated database retrieval system
