Candidatus Nitrosocosmicus franklandianus: NFRAN_3019
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Entry
NFRAN_3019 CDS
T05935
Symbol
rnhB
Name
(GenBank) Ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
nfn
Candidatus Nitrosocosmicus franklandianus
Pathway
nfn03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NFRAN_3019 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfn03032
]
NFRAN_3019 (rnhB)
Enzymes [BR:
nfn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
NFRAN_3019 (rnhB)
DNA replication proteins [BR:
nfn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
NFRAN_3019 (rnhB)
Elongation factors (archaeal)
NFRAN_3019 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Ribosomal_L13
Motif
Other DBs
NCBI-ProteinID:
VFJ15342
UniProt:
A0A484IH35
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All DBs
Position
NFRAN:complement(2679169..2679816)
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AA seq
215 aa
AA seq
DB search
MILGGIDEAGRGSIMGPLVVAGIALDKNSILQLQSEGVADSKKLTYLKRERLYPKIVSHA
KSIFICRIDPKTIDFYVNQKKLNLLEAKFMTIISNNIFADKIIIDACDVNLVRFKQSIVQ
NLVNRDVKIYCYHKADLDNIVVSAASIIAKVTRDRQIEKIGRRLNQQIGSGYPSDPKTKI
FLRNNIENTLVKEHIRYSWNPVKYLLSDLAQTKIL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
ttgattttaggaggaattgacgaggcaggtcgtggttcaattatgggtcctcttgttgtt
gcaggaattgctctagacaaaaatagtatcctacaattgcaaagcgagggtgtggctgat
tcgaaaaagctgacttacttgaagagggaacgcctttatccgaagatagtctcgcatgct
aaatcgatttttatatgtaggatagatcccaaaacgatcgatttttatgtaaatcaaaag
aaattgaatttattagaagcaaaattcatgactataatttcaaataatatattcgcagac
aagattataatcgatgcctgtgatgtaaatttagtcaggtttaaacaaagcatagttcaa
aatcttgtaaatcgggacgtaaaaatttactgctatcataaggcagatttggacaacatt
gtagtttctgctgcctcaataattgcaaaagttactagagacagacaaatagaaaagatc
ggaagaaggctgaatcagcagattggatcaggctacccttctgatcccaaaacaaaaatc
tttttaagaaacaatatagaaaatacattggtcaaagaacacatcagatattcgtggaat
cccgtaaagtatttactatcagatctggctcaaaccaaaattctctag
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