Nocardia farcinica NCTC11134: ERS450000_00063
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Entry
ERS450000_00063 CDS
T04524
Symbol
miaB
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
nfr
Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nfr03016
]
ERS450000_00063 (miaB)
Enzymes [BR:
nfr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
ERS450000_00063 (miaB)
Transfer RNA biogenesis [BR:
nfr03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
ERS450000_00063 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
DUF4088
Motif
Other DBs
NCBI-ProteinID:
CRY73296
UniProt:
A0A0H5NTE6
LinkDB
All DBs
Position
1:54847..56358
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AA seq
503 aa
AA seq
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MTRARSYEIRTFGCQMNVHDSERLSGLLEDAGYVKAAPGATADLVVFNTCAVRENADNKL
YGTLGHLAPVKAGRPGMQIAVGGCLAQKDRDTVVRKAPWVDVVFGTHNIGSLPVLLERAR
HNEQAQVEILESLEAFPSTLPAKRESAYAGWVSISVGCNNTCTFCIVPALRGKEVDRRPG
DVLAEVQALVDQGVLEVTLLGQNVNSYGASFADPDEPRDRGAFAKLLRACGGIEGLERVR
FTSPHPAEFTDDVIEAMAQTPNICPQLHMPLQSGSDRVLKAMRRSYRKARYLGIIEKVRA
AMPHAAITTDIIVGFPGETEEDFQETLDVVRQARFTSAFTFQYSKRPGTPAAEMADQVPK
QVVQERYDRLIALQEEISLAANRELIGTEVELLVAEGSGKKNAATARMSGRARDGRLVHF
RPGGTAEPVRPGDLVTVDITEAAPHHLIADAPVKTHRRTRAGDAHERGITPKTAPIGVGL
GLPRIGAPAPEPVAAGCSTGCGG
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagcgcgcagttacgagatccgtaccttcggctgccagatgaacgtgcacgat
tccgaacgtctgtccggtctgctcgaggacgccggctacgtcaaggccgcgccgggggcg
acggccgacctggtggtgttcaacacctgcgcggtccgcgagaacgccgacaacaagctg
tacggcaccctgggccacctcgcgccggtgaaggcgggcaggccggggatgcagatcgcc
gtgggcggctgtctggcccagaaggaccgcgacaccgtggtgcgcaaggcgccctgggtg
gacgtggtgttcggcacgcacaacatcggctcgctgccggtgctgctcgagcgcgcccgc
cacaacgagcaggcgcaggtggagatcctggagtcgctggaggcgttcccctcgacgctg
cccgccaagcgcgagtccgcctacgcgggctgggtgtcgatctcggtgggctgcaacaac
acctgcaccttctgcatcgtgcccgcgctgcgcggcaaggaggtcgaccgcaggcccggt
gacgtgctcgccgaggtgcaggccctggtcgatcagggcgtgctcgaggtgacgctgctc
ggccagaacgtcaactcctacggcgcgtccttcgccgacccggacgagccgcgcgaccgc
ggcgccttcgccaagctgttgcgcgcgtgcggcggaatcgaggggctggagcgggtgcgc
ttcacctcgccgcatccggcggagttcaccgacgacgtcatcgaggcgatggcgcagacc
cccaacatctgcccgcagctgcacatgccgttgcagtccggctcggatcgggtgctcaag
gcgatgcggcgctcctaccgcaaggcgcgctacctgggcatcatcgagaaggtgcgggcg
gcgatgccgcacgcggccatcaccaccgacatcatcgtcggcttccccggcgagaccgag
gaggacttccaggagaccctggacgtggtgcgccaggcccggttcaccagcgcgttcacc
ttccagtactccaagcggcccggcaccccggccgcggagatggccgaccaggtgcccaag
caggtggtgcaggagcgctacgaccggctgatcgcgttgcaggaggagatctcgctggcg
gccaaccgcgagctgatcggcaccgaggtggaactgctggtcgccgagggctcgggcaag
aagaacgccgccaccgcgcggatgagcgggcgcgccagggacggcaggctcgtgcacttc
cggcccggcggcaccgccgagccggtccggcccggcgacctggtcaccgtcgacatcacc
gaggccgcgccgcatcacctgatcgccgacgcgccggtcaagacgcatcggcgcacccgg
gcgggcgacgcgcacgagcgcggcatcaccccgaagaccgcgcccatcggtgtcggtctc
ggcctgccccgtatcggcgcgcccgcccccgagccggtggccgcgggctgctcgaccggt
tgcggcggatga
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