Nocardia farcinica NCTC11134: ERS450000_00097
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Entry
ERS450000_00097 CDS
T04524
Symbol
sigB_1
Name
(GenBank) Sigma-37
KO
K03090
RNA polymerase sigma-B factor
Organism
nfr
Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfr03021
]
ERS450000_00097 (sigB_1)
Transcription machinery [BR:
nfr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ERS450000_00097 (sigB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
HTH_3
HTH_37
GntR
HTH_31
HTH_Crp_2
HTH_24
MarR
HTH_Tnp_4
HTH_Tnp_ISL3
GerE
Trp_repressor
DUF7343
KORA
HTH_10
LacI
HTH_7
HTH_26
Motif
Other DBs
NCBI-ProteinID:
CRY73360
UniProt:
A0A0H5NC24
LinkDB
All DBs
Position
1:complement(86607..87452)
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AA seq
281 aa
AA seq
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MLETAATTRTTTRPTARRPGQAEDSYDNIEPWFAELAALDEHDPRRRALREHIIGLCLPL
ADHIARRFSGRGEAFDDLHQTARLGLVQAVDRFDVRRGSSFLAFAVPTIMGEVRRHFRDH
TWALRVPRRAKELQAMIGPATEKLSQRHGRMPTAREIAAELDVELVEVTRALVAANAYST
NTLHAVGRDDDGNVGLSIGDSLGTEEPCYRLMEDAMAVRPLIAALPERERQVLIWRFYDS
LTQSQIAERLGVSQMQVSRILNRTLTRLREEALAEPTAAVA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagaccgccgcgacaacacgaaccaccacccgcccgacggcacgcaggccgggc
caggccgaagacagttacgacaacatcgaaccgtggttcgccgaactggcggcgctcgac
gagcacgacccgcgcaggcgggcattacgcgaacacatcatcgggctgtgcctgccgctg
gccgaccacatcgcccgccgcttctccggccgcggcgaagccttcgacgatctgcaccag
accgcgcggctgggcctggtgcaggcggtggaccgattcgacgtgcgccgcggcagctcc
ttcctcgccttcgcggtgcccaccatcatgggcgaggtgcgcaggcacttccgcgaccac
acctgggcgctgcgggtgccgcgccgcgccaaggaactgcaggccatgatcggcccggcc
accgagaaactgtctcagcggcacggtcgcatgccgacggcccgcgagatcgccgccgaa
ctcgacgtcgagctggtggaggtgacccgcgcactggtggccgccaacgcctactccacc
aacaccctgcacgctgtcggtcgcgacgacgacggcaacgtcggcctgtccatcggcgac
agcctcggcaccgaggagccgtgctaccggctgatggaggacgcgatggcggttcgcccg
ttgatcgccgcgctccccgagcgggaacgccaggtgttgatctggcggttctacgattcg
ctcacccagtcccagatcgccgagcgtctcggcgtctcccagatgcaggtctcgcggatc
ctcaaccgcaccctgacccggctgcgcgaggaagcgctggccgaacccacggccgccgtg
gcctga
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