Nocardia farcinica NCTC11134: ERS450000_00364
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Entry
ERS450000_00364 CDS
T04524
Name
(GenBank) ABC-type oligopeptide transport system%2C periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ERS450000_00364
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nfr02000
]
ERS450000_00364
Transporters [BR:
nfr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
ERS450000_00364
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
CRY73882
UniProt:
A0A0H5NFD6
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All DBs
Position
1:312889..314604
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AA seq
571 aa
AA seq
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MRQPRSVAVRLAGACTALALAAGPATGCSGQSQVPSVGYGVDAVITTYNGGSTLGVSSGS
AAVFQRVLTGFFYTGPEGQQVADTDAGTAKEVPGESQTIQYRLNPDGVYSDGVPTSCDDL
VLTWAARSGRFTKAGPGGQVPMFDAASTAGYADIERVDCEPGSKDATVVFRPGARYLPWR
TLFAAGELMPAHVAARVAGVPNVVSVVQSGDPAAMQRLADFWNTGWNLGTGDLDLSRFPS
SGPYRIESFSPRDGLVLVANERWWGNAAETGRVVVYDKTVDLKAKIADNAVSVLDIGAGS
IPDLDLAGFTASTVPGRGAEQLVLATGGVLGSVEARRAFARCVPRQALYNDLGKAAEIPS
TGLGTGPLNSLITQQDSLFYGATTGAAEPYEVTDVAGARAGFAGTPNPTIRIGYLSPDDR
RAQTVARIAESCKAAGITVVDAGAPDFRPNQLSEGAVDAILASTGATPGPAGSLTGTVAA
AALRTGNGLDFGRFGNGRYDAITDQLAADDDSATQLNLLTEAENLLWSEMPSIPLFATPR
TIAFGNGLHNGVAGPTQGGTGWNMDRWVLRR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagccacgcagcgtcgcggtgcggctggcgggggcgtgcaccgcgctcgcgctg
gccgcggggccggcgaccgggtgctccggacagagccaggtgccgtcggtcggctacgga
gtcgacgcggtgatcaccacctacaacggtggcagcaccctcggcgtgagcagcggctcg
gcggcggtgttccagcgggtgctgaccgggttcttctacaccggaccggaagggcagcag
gtcgccgacaccgatgcgggtaccgccaaggaggtgccgggcgagtcgcagacgatccag
taccggctgaacccggacggggtgtattccgacggcgtgccgacctcctgcgacgatctg
gtgctcacctgggccgcgcgcagcggccggttcaccaaagccggtccgggcggtcaggtg
ccgatgttcgacgcggcgagcaccgcgggctacgccgacatcgaacgggtcgactgcgag
ccgggttccaaggacgccaccgtggtgttccgccccggcgcacgctacctgccgtggcgc
accctgttcgccgccggtgagctgatgcccgcacacgtggcggcacgggtggcgggcgtg
ccgaacgtggtgtcggtggtgcagtccggcgatcccgccgccatgcagcggctggccgac
ttctggaacaccggctggaatctcggcaccggtgatctcgacctgtcccggttcccgtcc
tcggggccctaccgcatcgaatccttcagtccccgtgacggtttggtgctggtggccaac
gagcgctggtggggcaacgcggccgagaccggacgcgtggtggtctacgacaagaccgtg
gacctgaaggccaagatcgccgacaacgccgtgagcgtgctcgacatcggcgcggggtcg
attcccgatctggacctggccgggttcaccgcgagtacggtgcccggccgcggcgccgag
caactcgtgctggccaccggcggcgtgctgggctcggtggaggcccgccgggcgttcgcc
cggtgcgtgccgcgtcaggcgctctacaacgacctgggcaaggccgccgagatcccgagc
acagggctgggcaccgggccgctgaattcgctgatcacccagcaggattcgttgttctac
ggcgcgaccaccggtgccgccgagccgtacgaggtgaccgatgtggccggggcgcgggcg
ggcttcgcggggacgccgaaccccaccatccgcatcggctacctgagcccggacgaccgg
cgcgcgcagaccgtggccaggatcgccgagtcgtgcaaggcggcgggtatcaccgtcgtc
gacgcgggtgcccccgacttccggccgaaccagctcagcgagggtgcggtggacgcgatc
ctggcgagcacgggcgccacgcccggcccggcgggctcgttgaccggcacggtcgcggcg
gcggcgctgcgcaccggcaacggtctcgatttcggccgcttcggcaacggccgctacgat
gcgatcaccgatcagcttgccgccgacgacgattcggccacgcagctgaacctgctgacc
gaggccgagaacctgctgtggtcggagatgccgagcatcccgctgttcgccaccccccgc
accatcgccttcggcaacggtctgcacaacggggtggccggtcccacacagggtggcacc
ggctggaacatggatcgctgggtgttgcggcgctga
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