Nocardia farcinica NCTC11134: ERS450000_00499
Help
Entry
ERS450000_00499 CDS
T04524
Symbol
csd_1
Name
(GenBank) Probable cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr00450
Selenocompound metabolism
nfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
ERS450000_00499 (csd_1)
Enzymes [BR:
nfr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
ERS450000_00499 (csd_1)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
ERS450000_00499 (csd_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
SelA
Aminotran_1_2
KYNU_C
Motif
Other DBs
NCBI-ProteinID:
CRY74133
UniProt:
A0A0H5NF18
LinkDB
All DBs
Position
1:455498..456760
Genome browser
AA seq
420 aa
AA seq
DB search
MTAAPVTGRTLDVARIRADFPILSRTVRDGKPLVYLDSGATSQRPLAVLDAEREFLTERN
SAVHRGAHQLAEEATDAYEGARADIARFVGVDAGEIVFTKNATESLNLVTYSFADNRFPY
HVGPGDEIVVTELEHHANLVPWQELARRTGATLKWYGITDDGRIDLDSLELSPATKVVAF
THQSNVTGAVSPVEELVRRATAVGALTVLDACQSVPHMPVDFRALGVDFAAFSGHKMLGP
SGVGVLYGRRALLEETPPFITGGSMIETVTMEGSTFAPPPQRFEAGVPMTSQVVGLGAAV
RYLEGIGMAAVAEHEHALTGAALAGLGAIDGVRIVGPTENVDRGGAVSFVVDGIHAHDVG
QILDDEGVAIRVGHHCAWPLMRRLGVPATARASFAVYNTLDEVEQLVAAVRKAQRFFGVA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgcgcctgtcacgggccggacactcgacgtcgcccggatccgggccgacttc
ccgatcctgagccgcacggtccgggacggtaagccgttggtgtacctggactccggcgcc
acctcgcagcgaccgctggccgtgctcgacgccgaacgcgaattcctcaccgagcgcaac
tccgcggtgcaccgcggcgcgcatcagctggccgaggaggcgaccgacgcctacgagggc
gcccgcgccgacatcgcccgcttcgtcggtgtcgatgccggggagatcgtgttcaccaag
aacgcgaccgagtcgctgaacctggtgacctactccttcgccgacaaccggttcccctac
cacgtgggaccgggcgacgagatcgtggtcaccgaactcgagcaccacgcgaacctggtg
ccgtggcaggagctcgcgcggcgtaccggcgccaccctgaagtggtacggcatcaccgac
gacggccgcatcgacctggactcgctggagctctcgcccgccaccaaggtcgtcgcgttc
acccaccagtccaacgtgaccggcgcggtgtcgccggtcgaggaactggtgcggcgcgcg
acggcggtgggcgcgctcaccgtgctcgacgcctgccagtcggtgccgcacatgccggtg
gacttccgggcgctcggcgtggacttcgccgccttctccggacacaagatgctcggcccc
tccggtgtcggcgtgctctacggccgccgcgcgctgctcgaggagaccccgccgttcatc
accggcggctcgatgatcgagaccgtgacgatggagggcagcaccttcgccccgccgccg
cagcggttcgaggccggcgtgccgatgacctcgcaggtcgtcgggctcggcgcggccgtg
cggtatctcgagggcatcggcatggccgcggtcgccgagcacgagcacgcgctcaccggt
gccgcgctcgcgggtctgggcgccatcgacggcgtgcggatcgtcggccccaccgagaac
gtggaccgtggcggcgcggtgtcgttcgtggtggacggcatccacgcccacgacgtcggc
cagatcctcgacgacgagggcgtggccatccgggtcgggcaccactgcgcctggccgctg
atgcgccgcctcggcgtgcccgccaccgcccgtgcctccttcgcggtctacaacaccctc
gacgaggtcgagcagttggtggccgcggtgcggaaggctcagcgcttcttcggggttgca
tag
DBGET
integrated database retrieval system
