Nocardia farcinica NCTC11134: ERS450000_00620
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Entry
ERS450000_00620 CDS
T04524
Name
(GenBank) Eukaryotic DNA topoisomerase I%2C catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nfr
Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfr03032
]
ERS450000_00620
03400 DNA repair and recombination proteins [BR:
nfr03400
]
ERS450000_00620
Enzymes [BR:
nfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ERS450000_00620
DNA replication proteins [BR:
nfr03032
]
Prokaryotic type
DNA Topoisomerases
ERS450000_00620
DNA repair and recombination proteins [BR:
nfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ERS450000_00620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
CRY74346
UniProt:
A0A0H5NWE6
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All DBs
Position
1:577770..578849
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AA seq
359 aa
AA seq
DB search
MRLRRSRPDGPGFLRVRRGRGFSYVTSDGETVTDEETLARIKALVIPPAWRDVWICPYPN
GHLQAVGVDAAGRKQYLYHEQWRRERDEVKFDRVLEMAARLPEFRARIAADLELPGLERR
RVEAVALGLIDRGVFRVGGEEYAQENGTRGMATLLRAQVTVSGAEMTFDYIAKSGIRRRV
RIEDPALARAVRALKRSRAESERLLTYRCPDGAYRELHAEEINARFKELVGEECSAKDLR
TWQGTVLAAVGFGAIALPTSQRARNKAIRAVMVDVSNALGNTPAIAKSSYVDPRVVAAFE
EGATIAAAMRRADRVTDLTEQQQIIDRAVIRLITAQQKRARRAARAVRAGVARQARAAA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgcggcgcagcagacccgacggccccggcttcctgcgggtgcggcgcgggcgc
ggcttctcctacgtcaccagcgacggcgaaaccgtcaccgacgaggagaccctcgcgcgg
atcaaggcactggtcatcccgcccgcctggcgggacgtgtggatctgcccctacccgaac
gggcacctgcaggccgtcggtgtcgacgccgccgggcgcaagcagtacctctaccacgag
cagtggcgccgcgaacgcgacgaagtgaagttcgaccgggtgctggagatggcggcccgg
ctaccggagttccgcgcgcggatcgccgccgatctggagctgcccggcctggagcggcgc
cgggtcgaggcggtcgcgctcgggctgatcgatcgcggcgtgttccgggtgggcggcgag
gagtacgcgcaggagaacggcaccaggggcatggccaccctgctccgcgcgcaggtcacg
gtgtcgggcgcggagatgaccttcgactacatcgccaagagcgggatccgccgccgggtc
cgcatcgaggatcccgccctggccagggcggtgcgcgcgctgaaacgcagccgcgccgag
tccgagcgtctgctcacctaccgctgtcccgacggggcctaccgcgaactgcacgccgag
gagatcaacgcgcgcttcaaggagctggtcggcgaggagtgcagcgccaaggacctgcgc
acctggcagggcacggtgctggccgccgtcgggttcggcgccatcgcgctgccgacctcg
cagcgcgcacgcaacaaggcgatccgggcggtgatggtggacgtgtccaacgcgttgggc
aacacccccgccatcgcgaagtcctcctatgtggacccgcgggtggtggccgcgttcgag
gagggcgcgacgatcgcggcggcgatgcggcgggccgaccgcgtcaccgatctcaccgag
caacagcagatcatcgaccgggccgtcatccggctgatcaccgcgcagcagaagcgggcg
cgccgggcggcgcgagccgtccgggccggggtggccaggcaggcgcgcgcggcggcgtga
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