Nocardia farcinica NCTC11134: ERS450000_00872
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Entry
ERS450000_00872 CDS
T04524
Name
(GenBank) ATPase involved in DNA repair
Organism
nfr
Nocardia farcinica NCTC11134
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Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
Motif
Other DBs
NCBI-ProteinID:
CRY74711
UniProt:
A0A0H5NXC2
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All DBs
Position
1:complement(851678..855886)
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AA seq
1402 aa
AA seq
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MSVIHGGVRFIPTRAGIINLWDYRDQEFCFADGRLVLRGPNGSGKTKALEVLFPFVLDGR
IEPRRLNPFAGEERTMKSNLLYRKLDSAYSYVWMEFARGRWADPEVVTVGIGMRATRSSD
KVTRWYFVADGRVGVDFSLIGPDDRPLTRKQLAEQIGTDAIVDRPMEYRAAIDARMFGLG
AQRYDQLINLILTLRRPQLAKNLDPRGLSQALTDGLRPLDDQLILDAARSFSDMEEVGRT
LEGLVHADTATRAFVDVYRKYLAVQAKTEVDQVRARLDAVTHASTALFAASALRQRREAE
RAAAQDRADDADRAYEQALTDRETLQRSSAYEGKQQLDDLADAVRRLESSAAVHRAKAVE
AQQTVAQRAQELDRVRADVREAAAALSRGEDELRSAAEAAGIAWTTPSRDDALTTAVLAR
AEERDADVRAVRAVLARVEAAQAERTRAERLAERAGADRERAAADVAHAEAAVELARGRA
AAALREWWDAHGETYGALGAELFEAVDAALGQAGSDEAATPAEVVAERTEPLLEELREAR
LAARTRAAAATARIADLEAERDAIAAQRDDAPPARHTRTDAPDDGRGAPLWRLVRFADDV
PAETAAGIEAALDAAGLLDARVGPGEPPAGYRSDQFLIPLPPDRRPTGRTLADVLVVEDD
SPELAVPGTVVADILASIAVRDAAGSDEVPAHPALDVTGGYRHGVQVGRHHKPHAEYIGA
TARARRREERLAELDAALAAATEDRESAEAAAKQADATLAALTTAAKALPRATAVTGALR
AVAEAAGVVRSRTEAAAQAERELDQAVTEVTALEKKLRAAAAEHRTPRTAADLDALAAAV
RHFESTGTALARLRADHERALEREREGADRLDEARGLAEAFAEEAEAARAGYDEQQRKLA
TLREALGAGAAEIDAELARARERIDACRAEQKAARKAANAAIEAVGDAEAAYRTAHEALG
TALTEVLAQVRALAPYAQPDLLALLGVSPELRWPSSDAAWSTPDQLLYRIAQSDPETEPR
VLPDEVAALFEALSTATATVRAGEAARKSTRSAVTAALQEFDAALAASGRDYRLRWDAAD
GLTVVQVQDEHGLCPLADFATRVASARRDQELLLTDAERRILEDALLTGLAQQIHERTGD
ARELIAKMGAEMKQRRMSSGNTIGVHWVLADDLSDSARAMCKLLDRDAAALSPEDLAAIR
AHFAAEIRAARAEHPERSYPEILAATLDYRRWRVFSFTLVGADGSEDKLTVARHSALSGG
EQSVSLHLPLFAAAHVMLDSADPQAPRLLALDEAFAGVDDNGRSELLGLSVQFDLDLFMT
GYDLWITYPHVPGCAHYDLAHSAAEHTVSATLLVWDSGDLLAEHSGSDLTAALGSPNRRR
VPVGIEGGLTLDDMPGAPAPLA
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcatccacggcggagtgcgtttcatcccgaccagggccgggatcatcaacctg
tgggactaccgcgatcaggagttctgcttcgccgacggcaggctggtgctgcgcgggccc
aacgggtcgggcaagacgaaggctctcgaggtgctgttcccgttcgtgctcgacggccgt
atcgagccgcgccggctgaacccgttcgcgggtgaggaacgcacgatgaagtcgaatctg
ctgtatcgcaagctggattcagcgtattcgtatgtgtggatggagttcgcgcgcgggcgg
tgggccgatcccgaggtcgtcacggtcggcatcggcatgcgcgccacccgctcctcggac
aaggtgacgcgctggtatttcgtggccgacggccgggtgggagtggacttctcgctcatc
ggccccgacgaccgcccgctgacccgcaaacaactcgccgaacagatcggcaccgacgcg
atcgtggaccggccgatggagtatcgggcggcgatcgatgcgcgcatgttcggcctcggc
gcgcagcgctacgaccagctcatcaatctgattctcacgctgcgccgtccgcagctggcc
aagaatctcgatccgcgcgggctctcgcaggccctcaccgacggcctgcgcccgctcgac
gatcagctgatcctggacgcggcccgctccttcagcgacatggaggaggtcgggcgcacc
ctcgaagggctcgtgcacgccgacaccgccacccgtgctttcgtcgacgtgtatcgcaaa
taccttgcggtccaggcgaaaacggaggtcgaccaggttcgtgcccggctcgacgcggtc
acgcacgcgagcacggcgctgttcgccgcgagcgcgctgcggcagcggcgcgaggccgag
cgcgccgccgcgcaggaccgcgccgacgacgccgaccgcgcctacgagcaagccctcacc
gatcgcgaaacgctgcaacggtcgagcgcctacgagggcaaacagcaactcgacgacctc
gccgacgcggtgcgcaggctggagagttcggcggctgtgcaccgtgcgaaggcggtggag
gcccagcagacggtggcgcagcgcgcgcaggagctcgaccgggtgcgcgcggacgtgcgg
gaggccgccgcggcgctcagccgcggggaggacgaattgcgcagcgccgccgaggccgcg
gggatcgcctggacgacgccgtcccgcgacgacgcgctcaccaccgccgtgctggccagg
gccgaggagcgcgacgccgacgtgcgcgcggtccgcgcggtgctcgcgcgggtggaggcg
gcgcaggccgagcggacccgggccgagcggctggccgagcgcgccggcgccgaccgggag
cgggcggcggccgatgtcgcgcacgccgaggccgccgtggagctggctcgcggccgcgcg
gcggcggcgctgcgcgaatggtgggacgcacacggcgagacctacggcgccctcggcgcc
gaactgttcgaggccgtcgacgccgcgctgggccaggccggttccgacgaggccgccacg
cccgccgaggtggtggccgagcgcaccgaaccgttgctggaggagttgcgggaggcccgg
ctggccgcccgcacccgcgcggccgccgcgacggcccggatcgccgacctcgaggccgaa
cgcgacgccatcgccgcccagcgcgacgacgctccgcccgcccggcacacccgtaccgac
gcaccggacgacgggcggggcgcacccctgtggcggctggtccggttcgccgacgacgtg
ccggccgagaccgccgccgggatcgaggccgccctggacgccgccggcctgctcgacgcc
cgggtcggcccgggcgagccgcccgccggttatcgttccgatcagttcctgatcccgctg
cccccggatcggcgccccaccggccgcacgctcgccgatgtgctcgtggtcgaggacgat
tcgcccgaactggccgttccgggcacggtcgtcgccgacatcctggcctccatcgcggtg
cgcgacgccgccggttccgacgaggtcccggcgcatcccgcgctcgacgtcaccggcggc
taccggcacggcgtgcaggtcggcaggcaccacaaaccgcacgccgagtacatcggcgcc
accgcccgcgcgcgccgccgcgaggagcgcctggccgaactcgacgccgcgctggctgcc
gccaccgaggaccgcgaatccgccgaggcggccgcgaaacaggccgatgccaccctggcg
gcgctgaccacggcggccaaggcactgccccgcgccaccgccgtcaccggcgcgctgcgc
gccgtcgccgaggcggcgggtgtggtccgctcccgcaccgaggccgccgcccaggccgaa
cgcgaactcgatcaggcggtcaccgaggtcaccgcgctggagaagaagctgcgcgccgcg
gccgccgagcaccgcacgccccgcaccgccgccgatctcgacgccctggccgccgccgtc
cgccatttcgagagcaccggcaccgccctggcgcggctgcgcgccgatcacgaacgcgcg
ctcgaacgcgaacgcgagggcgccgaccgcctcgacgaggcccgcggcctggccgaggcc
ttcgccgaggaagccgaagccgcgcgcgccggttacgacgagcagcagcgcaaactggcg
acgttgcgcgaggcgctgggcgcgggcgccgccgagatcgatgccgaactcgcgcgggcc
cgcgagcgcatcgacgcctgccgcgccgagcagaaggccgcccgcaaggccgccaacgcg
gccatcgaggcggtcggtgacgccgaggccgcctaccgcaccgcgcacgaggcgctcggc
accgccctcaccgaggtgctggcgcaggtccgcgcgctcgccccctacgcgcaaccggat
ctgctggcactgctcggcgtctcccccgagctgcgctggcccagcagcgacgccgcctgg
tcgacaccggatcagctgctctaccgcatcgcgcaatcggatcccgagaccgagccgcgg
gtcctgcccgacgaggtggccgcactgttcgaggcactgtcgacggccaccgcgacggtg
cgggccggggaggccgcgcgcaaatccacccgcagcgccgtcaccgccgcgctgcaggag
ttcgacgccgcgctggccgcctcgggccgcgactaccggttgcgctgggacgccgccgac
gggctcaccgtcgtgcaggtgcaggacgagcacggactgtgcccgctggccgatttcgcc
acccgcgtcgcgtccgcccgccgcgatcaggagctgctgctcaccgacgccgaacgccgc
atcctcgaagacgccctgctcaccggcctggcccagcagatccacgaacgcaccggcgac
gcgcgcgaactcatcgccaagatgggcgcggagatgaaacagcggcggatgtcctcgggc
aacaccatcggcgtgcactgggtgctggccgacgacctctccgacagcgcgcgggcgatg
tgcaagctgctcgaccgcgacgccgccgcgctgagcccggaggatctcgccgccatccgc
gcgcatttcgccgccgagatccgcgccgcccgtgccgagcatcccgaacggtcctacccg
gagatcctggccgccaccctcgactaccgccggtggcgagtgttctcgttcaccctggtc
ggtgccgacggcagcgaggacaagctcaccgtcgcccggcacagcgcgctgtccggtggt
gagcaatccgtgtcactgcacctgccgctgttcgccgccgctcacgtcatgctcgactcc
gccgacccgcaggccccgcggctgctggcgctggacgaggcgttcgccggcgtcgacgac
aacgggcgcagcgaattgctcggcctgagtgtgcaattcgacctcgacctgttcatgacc
ggctacgacctgtggatcacctacccgcacgtgcccggctgcgcccactatgacctggct
cactccgcggccgagcacaccgtcagcgccactctgctggtgtgggacagtggcgatctg
ctcgccgagcacagcggatcggatctgaccgccgcgctcggctcccccaaccgccgtcgg
gtgccggtcggcatcgaaggcggcctgaccctcgacgacatgccgggcgccccggcgccc
ctggcctga
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