Nocardia farcinica NCTC11134: ERS450000_00902
Help
Entry
ERS450000_00902 CDS
T04524
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
nfr
Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nfr03051
]
ERS450000_00902 (pafA)
Enzymes [BR:
nfr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
ERS450000_00902 (pafA)
Proteasome [BR:
nfr03051
]
Prokaryotic proteasome
Bacterial regulatory particles
ERS450000_00902 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
DUF244
Motif
Other DBs
NCBI-ProteinID:
CRY74741
UniProt:
A0A0H5NXF0
LinkDB
All DBs
Position
1:888035..889378
Genome browser
AA seq
447 aa
AA seq
DB search
MGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGSHPEYA
TAECDSLHQLVTHDRAGERVLEELLIDAEQRLAEEGIGGDIYLFKNNTDSAGNSYGCHEN
FLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMLKVGTAALVLEMIEAGVAFRDFAL
DNPIRAIREVSHDLTGRRPVRLAGGRQASALDIQREYYARAVEHLRNRDRDPQIDQVVDL
WGRALDAVEAQDFAKVDTEIDWVIKRKLFQRYQDRYDMELSDPKIAQLDLAYHDIKRGRG
VFDLLQRKGLAKRITEDEAVDAAVDTPPQTTRAKLRGDFITAAQEAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRSVDERVDRLIASM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggggatcgagaccgagttcggtgtgacatgcaccttccacggtcaccgtcggctgtcc
cccgacgaagttgcccggtacctgttccgccgggtggtgtcctggggccgtagctcgaac
gtgttcctccgcaacggtgctcgcctctacctcgacgtcggctcgcatcccgagtacgcc
accgccgagtgcgacagcctgcaccagctggtcacccacgatcgcgccggtgagcgggtg
ctcgaggagctgctcatcgacgccgagcagcggctggccgaggagggtatcggcggcgac
atctacctgttcaagaacaacaccgactcggcgggcaactcctacggctgccacgagaac
ttcctggtggtgcgggccggcgagttctcccggatctccgacgtgctgctgccgttcctg
gtcacccgccagctgatctgcggcgcgggaaaggtgttgcagaccccgaaggcggccacg
ttctgcctgtcgcagcgcgccgagcacatctgggagggcgtctcctcggcgaccacccgc
tcgcgcccgatcatcaacacccgcgacgagccgcacgccgacgccgagaagtaccggcgc
ctgcacgtcatcgtcggcgactccaacatgtccgagaccaccaccatgctcaaggtgggc
acggcggcgctggtgctggagatgatcgaggcgggcgtggccttccgcgacttcgccctc
gacaacccgatccgcgccatccgcgaggtcagccacgacctcaccggccgccgcccggtg
cggttggcgggcggccgccaggccagcgccctcgacatccagcgcgagtactacgcgcgc
gccgtcgagcacctgcgcaaccgcgaccgcgatccgcagatcgaccaggtcgtcgacctg
tgggggcgcgccttggacgcggtggaggcgcaggacttcgccaaggtcgacaccgagatc
gactgggtgatcaagcgcaagctgttccagcgctaccaggaccgctacgacatggagctg
tccgatcccaagatcgcccagctggacctggcctaccacgacatcaagcgcggtcgcggc
gtgttcgacctgctgcagcgcaagggcctggccaagcggatcaccgaggacgaggcggtc
gacgcggccgtggacaccccgccccagacgaccagggccaagctgcgcggtgacttcatc
accgccgcgcaggaggcgggccgcgacttcaccgtcgactgggtgcacctcaagctgaac
gatcaggcccagcgcaccgtgctgtgcaaggatccgttccgctcggtcgacgagcgggtg
gaccggctgatcgcctcgatgtga
DBGET
integrated database retrieval system
