Nocardia farcinica NCTC11134: ERS450000_00999
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Entry
ERS450000_00999 CDS
T04524
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nfr
Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfr03400
]
ERS450000_00999 (phrA)
Enzymes [BR:
nfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ERS450000_00999 (phrA)
DNA repair and recombination proteins [BR:
nfr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ERS450000_00999 (phrA)
Prokaryotic type
ERS450000_00999 (phrA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CRY74838
UniProt:
A0A0H5NH43
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All DBs
Position
1:complement(995376..996686)
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AA seq
436 aa
AA seq
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MTAIALFTRDLRVHDNPVLAAARDAGDAVVPLFVVDAHLVPDRCPPNRARFLAAAVRELD
AELRTRGGRLIVRRGVVADEVTRVVDETGARTVHLADDVSGYSAARADALRERLDRRGVR
LEPHPASITTVDGDVLRPATGRDHFAVFTPYFRRWSEVPRRAPLPPPDDLEVPDLPSAAL
PAPESLNRGEPSPQLSVGGETTGRALLDSWLAGPVDDYVETGDDLAADATSHLSPYLHFG
CLSPTELLHRVDVGSAGGQAFARQLAWRDFHHQLLAARPAVARHDYRPRPIRWRDDPQAL
AAWRSARTGFPIVDAALRQLHTEGWLPNRARLIAAAFLTKTLGLHWRAGAGHFLHWLVDA
DLANNQLNWQWVAGTGSDTRPNRGFNPLRQADRYDPDGLYVRRWIPELADLDGGRIHRPW
RAEVDYPSPIAECPGM
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccatcgcgttgttcacccgtgacctgcgggtgcacgacaaccccgtgctcgcc
gccgcccgggacgccggtgacgcggtcgtgccgctgttcgtggtcgacgcccacctggtg
ccggatcggtgcccgcccaaccgggcccgcttcctcgccgcggcggtgcgcgaactcgac
gccgaactccgtacgcggggtggacgtttgatcgtgcgacgtggcgtggtggcggacgag
gtgacgcgcgtggtcgacgagaccggggcgcgcacggtgcacctcgccgatgacgtcagc
ggatacagcgcggcgcgtgcggacgcgttacgggagagactggatcgccggggcgttcgg
ctcgagccgcacccggcgagcatcaccaccgtcgacggcgacgtgctgcggcccgccacc
ggtcgcgatcatttcgcggtcttcaccccgtatttccgccggtggtcggaggttccgcgg
cgcgcgccgctgccgccgccggatgacctcgaggtgccggacctgcccagtgcggcattg
ccggctcccgaatcgctgaaccggggcgagccgtcgccgcagctgtccgtcggcggcgag
accaccggccgcgcgctgctggattcctggctggccggcccggtcgacgactacgtcgag
accggtgacgatctcgcggcggacgccacctcacatctctcgccctacctgcacttcggc
tgcctgtcccccaccgaactgctccaccgcgtcgatgtcggcagcgcgggcggacaggcg
ttcgcccggcagctggcctggcgcgacttccaccaccagctgctggccgcccgcccggcc
gtggcccggcacgactaccggccgcgcccgatccgatggcgggacgacccgcaagcgctg
gccgcctggcgctcggcacgcaccggcttcccgatcgtggacgccgccctgcgccaactc
cacaccgaaggatggctgcccaaccgggcccggctgatcgccgccgccttcctcaccaag
accctcgggctgcactggcgcgcgggggcggggcatttcctgcactggctggtcgacgcc
gacctggcgaacaaccagctcaactggcagtgggtcgcgggcacgggcagcgacacccgg
ccgaatcgcggtttcaacccgctgcgccaagccgaccgctacgaccccgacggcctgtac
gtccggcggtggattcccgaactcgccgacctcgacggtggccgcatccatcggccgtgg
cgagccgaggtggattatccgtctccgatcgccgaatgcccggggatgtga
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