Nocardia farcinica NCTC11134: ERS450000_01001
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Entry
ERS450000_01001 CDS
T04524
Symbol
ycgE
Name
(GenBank) HTH-type transcriptional repressor YcgE
KO
K22491
MerR family transcriptional regulator, light-induced transcriptional regulator
Organism
nfr
Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfr03000
]
ERS450000_01001 (ycgE)
Transcription factors [BR:
nfr03000
]
Prokaryotic type
Helix-turn-helix
MerR family
ERS450000_01001 (ycgE)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR
B12-binding
HTH_Tnp_1
HTH_23
B12-binding_2
HTH_17
HTH_28
Terminase_5
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
CRY74840
UniProt:
A0A0H5NG06
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All DBs
Position
1:997373..998254
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AA seq
293 aa
AA seq
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MSAAEPTGSTGHNVTMPAVPVPPSGASGYPVRAVAERLGVPTATLRSWNRRYGIGPVQDR
PGSHRLYTETDIALLERMLELIRAGVSPSRAAATARGPAPAPGDRGPLLAAAFALDTATV
TAHLDAHLRAFGVVDTWETLCRPAFADIVARQGAGEGCIDVEHLLSWCIGAALQRAFPPS
AGPGALLACTSGETHALPLDVLRAALAERGLGARMLGPDVPTAALVDALGRHAEGAAVVL
WSHRESTALTSAVRACLGAGARVFVGGPGWDEVVLPPDADRLGSLAEAVDRLS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgctgcggagcccaccggatcgaccgggcacaatgtgacgatgcccgcggtcccg
gttcccccctccggcgcgtccggttacccggtacgcgcggtggccgaacgtctcggtgtg
ccgaccgcgaccttgcgcagctggaaccgtcgctacggcatcggcccggtccaggaccgg
cccggcagccaccgcctctacaccgagaccgacatcgcgctgctggaacgcatgctcgag
ctcatccgcgccggcgtcagcccgtcccgtgccgccgccaccgcccggggacccgcgccg
gcgcccggcgatcgcgggcccctgctcgcggccgccttcgccctcgacaccgccaccgtc
accgcacacctcgacgcccacctgcgcgccttcggcgtggtcgacacctgggagacgctg
tgccgccccgcattcgccgacatcgtcgcccggcagggcgcgggggagggctgcatcgac
gtcgagcacctgctgtcctggtgcatcggtgcggcgctgcagcgggcgttcccgccctcg
gccgggccgggtgcgctgctggcctgcacgagcggggaaacccacgccctgccgctggac
gtgttgcgcgcggccctggccgaacgcggcctgggtgcgcgcatgctcggccccgacgtg
cccaccgccgccctggtcgacgcgctgggcaggcacgccgagggcgccgccgtcgtgctc
tggtcgcaccgcgaatccaccgccctgacctcggccgtgcgggcgtgcctgggtgcgggt
gcgcgggtcttcgtcggcgggcccggctgggacgaggtcgtgctgccccccgatgccgac
cgtctcggcagcctcgccgaagccgtcgaccggctcagctga
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