Nocardia farcinica NCTC11134: ERS450000_01253
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Entry
ERS450000_01253 CDS
T04524
Symbol
mug
Name
(GenBank) G/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ERS450000_01253 (mug)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfr03400
]
ERS450000_01253 (mug)
Enzymes [BR:
nfr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
ERS450000_01253 (mug)
DNA repair and recombination proteins [BR:
nfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ERS450000_01253 (mug)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CRY75285
UniProt:
A0A0H5NH96
LinkDB
All DBs
Position
1:1244092..1244646
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AA seq
184 aa
AA seq
DB search
MVSAAYRPTPADLAAAAGTTIPDVVGPDLRVLFCGINPGLWSGATGHHFARPGNRFWPAL
FRSGFTPRLFRPDEQAELLALGLGITNVVPRTTAKADELTTAELREGGRALTERVRRYRP
KALAVLGIGAYRTAFGRPRTTVGRQDETIADTEIWVLPNPSGLNAHYTLDALAAEFRALR
EATR
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggtatcggccgcgtatcgacccacgcccgcggatctggcggccgccgccgggacgacg
attcccgacgtggtggggccggatctgcgggtgttgttctgcgggatcaatccggggctg
tggtcgggggcgaccgggcatcacttcgcgcggccgggaaaccggttctggcccgcgctg
ttccgttccggattcaccccgcgcctgttccggccggacgagcaggcggaattgctcgcc
ttggggttgggcatcacgaacgtggtgccgcggacgacggccaaggcggacgagctgacc
accgcggagttgcgcgagggcggtcgggcgctgaccgaacgggtccggcgataccgcccg
aaggcgctggccgtgctcgggatcggcgcctaccggaccgcgttcggccgtccgcgcacc
accgtcggccgccaggacgagacgatcgccgacaccgagatctgggtgctacccaacccc
agcggactcaacgcgcactacaccctcgacgccctggccgcggagttccgcgccctccga
gaggcgacgcgctag
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