Nocardia farcinica NCTC11134: ERS450000_01551
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Entry
ERS450000_01551 CDS
T04524
Symbol
recC
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ERS450000_01551 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfr03400
]
ERS450000_01551 (recC)
Enzymes [BR:
nfr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ERS450000_01551 (recC)
DNA repair and recombination proteins [BR:
nfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ERS450000_01551 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CRY75852
UniProt:
A0A0H5NL11
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All DBs
Position
1:complement(1561015..1564353)
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AA seq
1112 aa
AA seq
DB search
MPLHIRRAERADILADALAARLAVPQPDPFAAEVVAVPAKGVERWLTQRLSAVLGVSAGG
RDGVAANIRFPSPAALVAEALAACTGIAPEDDPWAHQRVVWTLLRVIDRAVAEPWCAVLA
RHLGAPSRGRDHRIGRRYATAAQLAALFDSYAAQRPALLLDWAAGGDGDGAGGEVPADLR
WQPRLWRMLRAEIGSPSPAERLAPACERLRAEPGLLDLPERLSLFGVTRLTTDQLAVLDA
VGAGREVDVWLVHPSPALWSALVGRPPARARAADTSASAVRHPLLTGLARDVRELQQRLA
GTGAIDTGPLSAPEAPSPQQLSLLAGVQAGIRDDAWPPARLPADGTVQVHACHGPARQVE
VLRDCLLGLFAADPTLEPRDVLIMCPEVEAYAPLVRAAFGARGGADEAPEPAHPAHLLRV
RLADRGRGVTNPLLAVVQTLLELADGRVTVTQVLDLAASETVRRRCGFDDDAIERLREWA
AAAGARWGIGQRQRQAFGLADFAQNTLNGAVDRILLGVTADESGDDWLDLALPLDDVDSN
DVDLAGRFAEFVDRLAVCLRDLRGPRPATEWAQVLGRALELLTDVPDSQSWVRTEARAEI
AAATEHAGDVPLRLADVAVLFADRLAARPTRANFRTGELTVCTMVPMRSVPHRVVVLLGL
DDDVFPRTGGVDGDDVLAREPLLGERDPRSEDRQLLLDAVLAARERLLIFHTGADPVTGS
PRPPAIPVAELLDVVRAHVGADAMAQVLTRHPLQSFDRRNFDPAAPFSFDTVALAGARAA
ARVPEPAPPFLPEPLPPAERGDVALADLIAFAEHPVRGFLWQRLGLRVPEHEEDLADALP
IELDGLAKWELGERMLAARLTGADPAGLRAAEWRRGTLPPFRLGGAVLDEIEHTVDTLVR
VAQPDYAAAPRAVDIAVDLGDGRRLTGTVPEVRGETLVRTTFSRVAAKHRIGAWVALLAL
AATEDRSWRAVTTGRGKFRRPAWRCELTAPDRPAAVAVLRDLVRLRDEGLTEPLPIAPAS
SAAYAERRVRGGSAEDAFAAAEREFDGGPNGPDKFGEHTDRHLRYVWGTAPRLDHLAAAP
APAGSPGEPTRFGALAVRLWTPLLAAETQGQP
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcacatccgacgggccgagcgcgcggacatcctggccgacgcgctcgccgcg
cgattggccgtgccgcagccggatccgttcgcggccgaggtcgtcgcggtgcccgccaag
ggggtcgagcgctggctgacccagcgcctgtccgcggtgctcggcgtgtccgcgggcgga
cgcgacggggtcgccgccaacatccgcttcccgtcacccgcggcgctggtcgccgaggcg
ctggccgcctgcaccggcatcgcgcccgaggacgacccgtgggcgcaccagcgggtggtg
tggacgctgttgcgggtgatcgaccgcgccgtcgccgagccgtggtgcgcggtgctggcc
cgccacctcggcgcgccctcgcgcggccgcgaccaccggatcggcaggcgctacgccacc
gccgcgcagctggccgccctgttcgacagctacgccgcgcagcgtccggccctgctgctg
gactgggccgccggcggcgacggcgacggcgccggcggcgaggtgcccgcggacctgcgc
tggcagccgcgcctgtggcggatgctgcgcgccgagatcggcagcccgagcccggccgag
cggctcgccccggcgtgcgagcggctgcgcgccgaacccggcctgctggacctgcccgag
cggctctcgctgttcggcgtcacgcgcctgaccaccgatcagctcgcggtgctcgacgcg
gtgggcgcgggccgcgaggtcgacgtgtggctggtgcatcccagtcccgcgctgtggtcg
gccttggtcggccgcccgcccgcgcgtgcccgcgccgccgacaccagcgcgagcgccgtc
cggcatccgctgctcaccgggctggctcgtgacgtccgcgaactccagcagcggctggcg
ggcaccggcgcgatcgacaccgggccgctgtcggcaccggaagcgccgtccccgcagcag
ctttcgctgctggccggcgtgcaggcaggcatccgcgacgacgcgtggccgcccgcgcgg
ctgcccgccgacggcacggtgcaggtgcacgcctgccacggtcccgcgcgccaggtggag
gtgctgcgcgactgtctgctcggcctgttcgccgccgatccgacgctggaaccgcgcgac
gtgctgatcatgtgcccggaggtcgaggcgtacgcgccgctggtgcgggcggcgttcggc
gcccggggcggcgccgacgaggccccggagccggcccaccccgcacacctgctgcgggtg
cgcctggccgaccgcggccgcggtgtgaccaatccactgctcgccgtcgtgcagaccctg
ctggagctggcggacgggcgcgtcaccgtgacgcaggtgctcgacctcgccgcctccgaa
accgtccgccgccggtgcgggttcgacgacgacgccatcgagcggttgcgcgagtgggcc
gccgcggcgggcgcgcgctgggggatcgggcagcggcagcggcaggcgttcggcttggcc
gacttcgcccagaacaccctcaacggcgccgtggaccgcatcctgctcggcgtcaccgcc
gacgaatccggcgacgactggctggatctcgcactgccgctggacgacgtggacagcaac
gacgtcgatctggccgggcgcttcgccgaattcgtcgaccgcctcgcggtgtgcctgcgc
gatctgcgcggcccgcgcccggccaccgagtgggcccaggtgctcgggcgggcgctggaa
ctgctcaccgacgtgcccgacagccagtcctgggtgcgcaccgaggcacgtgccgagatc
gcggccgccaccgagcacgccggggatgtgccgttgcggctggccgacgtcgcggtgctg
ttcgccgatcggctggccgcccggcccacacgcgccaacttccgcaccggggagctgacg
gtgtgcacgatggtgccgatgcggtcggtgccgcaccgggtggtggtgctgctcggcctg
gacgacgacgtcttcccgcgtaccggcggcgtcgacggcgacgacgtgctcgcccgggaa
ccgctgctgggcgaacgggatccgcgcagcgaggaccgccagctgctgctggacgccgtg
ctcgcggcccgcgagcggctgctgatcttccacaccggcgccgacccggtcaccggctcg
ccgcgcccgcccgcgatcccggtcgccgaactgctcgacgtggtgcgtgcccacgtcggc
gccgacgcgatggcgcaggtgctgacccggcacccgttgcagagcttcgatcgccgcaat
ttcgaccccgccgcgccgttcagcttcgacaccgtcgcgctggccggggcccgcgccgcc
gcccgggtgcccgagccggcgccgccgttcctgcccgaaccgctgccgcccgccgagcgg
ggcgatgtcgcactcgccgacctcatcgccttcgccgagcacccggtgcgcggattcctc
tggcagcgactgggtttgcgggttcccgagcacgaggaggacctcgccgacgcgttgccc
atcgagctcgacggcctggccaaatgggaactgggcgaacggatgctcgcggcccggctc
accggcgcggacccggcgggactgcgcgccgcggagtggcggcgcggcaccctgccgccg
ttccggctcggcggtgcggtgctcgacgagatcgaacacacggtggacaccctggtgcgg
gtcgcgcagccggattacgcggccgcgccgcgcgcggtcgacatcgccgtcgacctcggc
gacggccgccggttgaccggcacggtgccggaggtccgcggggagacgctggtgcgcacc
acgttctcgcgggtcgcggccaagcaccggatcggggcgtgggtggcgctgctggcgttg
gccgccaccgaggaccggtcctggcgcgccgtcaccaccggccggggaaagttccgtcgc
ccggcgtggcgctgtgagctcaccgcaccggaccgcccggcggccgtcgcggtgctgcgc
gacctggtgcgcctgcgcgacgagggactcaccgagccgctgccgatcgcgcccgcgtcc
tcggccgcctacgccgaacgccgggtgcgcggcggctcggccgaggacgccttcgccgcg
gccgagcgcgaattcgacggcggccccaacggtcccgacaaattcggcgaacacaccgac
cggcacctgcggtacgtgtggggcaccgccccgcgcctggaccacctcgccgccgccccc
gcgcccgcgggctcgcccggtgagccgacgcgcttcggcgcgttggccgtgcggctgtgg
accccgctgttggccgccgagacccaggggcaaccgtga
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