Nocardia farcinica NCTC11134: ERS450000_02053
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Entry
ERS450000_02053 CDS
T04524
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ERS450000_02053 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfr03019
]
ERS450000_02053 (groL)
03110 Chaperones and folding catalysts [BR:
nfr03110
]
ERS450000_02053 (groL)
03029 Mitochondrial biogenesis [BR:
nfr03029
]
ERS450000_02053 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfr04147
]
ERS450000_02053 (groL)
Enzymes [BR:
nfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ERS450000_02053 (groL)
Messenger RNA biogenesis [BR:
nfr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ERS450000_02053 (groL)
Chaperones and folding catalysts [BR:
nfr03110
]
Heat shock proteins
HSP60 / Chaperonin
ERS450000_02053 (groL)
Mitochondrial biogenesis [BR:
nfr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ERS450000_02053 (groL)
Exosome [BR:
nfr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ERS450000_02053 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ERS450000_02053 (groL)
Exosomal proteins of breast cancer cells
ERS450000_02053 (groL)
Exosomal proteins of colorectal cancer cells
ERS450000_02053 (groL)
Exosomal proteins of bladder cancer cells
ERS450000_02053 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CRY76845
UniProt:
A0A0H5NLN1
LinkDB
All DBs
Position
1:complement(2047221..2048870)
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AA seq
549 aa
AA seq
DB search
MAKELRYNKDARSRLEQGVNALADAVKVTLGPKGRNAVLEKLTGPPTITNDGVTIAREIQ
LRDPFANMGAQLVKEVAMKTNGLVGDGTTTATVLAQAMVREGLKAVDNGANPMRVRRGIE
RAVAAVIDSLRLQVAEVGGASDLHRIATLAASDDEVIGQAVAEAVAYVGRSGIVTTEESE
TLGLSVDIVDGIEFDHGYTSGYMVTDPERMEAVHVDPLILLTNKKITQVQEIMPSIEAAK
RADRPLVVLAEEVDGPALQLLVGGNMHKTMQSVVVRAPGFGHRRVAELEDLAVALGGHVV
AKDTGLELSEVTIEHLGSCDRITVTENQTTIVGGHGDQALLVARVAQLKTQRERAKIDAD
RESIDLRIARLTGRVAVIRVGGATSVELKERMLRVEDALAATQAAVEEGIVAGGGTALAQ
SHWALADLVLPGDEAVGCDVVRRALAEPVRWIAVNAGFDGDEVVDTVVDLPLGHGFNALT
GAYEDMFDDGVIDPFKVTRAALESAASIAALLITTETAVVEEVVGNPGAVLAPGFGDLAE
GMVRPSNIY
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagagttgcggtacaacaaggatgcgcgatcgaggctggaacagggcgtgaac
gctctcgccgacgcggtcaaagtcaccctcggccccaagggccgcaacgcggtgctggag
aagctcacgggaccgccgacgatcaccaacgacggcgtgacgatcgcgcgcgagatccag
ctccgcgatcccttcgcgaacatgggcgcccagctcgtcaaggaagtggcgatgaagacc
aacggactggtcggggacggcaccaccaccgcgaccgtcctcgctcaggccatggtcagg
gaaggactgaaagccgtagacaacggagccaatccgatgcgggtccgccgcggcatcgag
cgcgccgtcgccgcggtgatcgattcgctccgactgcaggtcgccgaagtcggtggcgcc
agcgatctgcaccgcatcgccaccctggccgcgagcgacgacgaggtcatcggccaagcc
gtcgccgaggcggtggcgtatgtcggccgttcggggatcgtcaccaccgaggagagcgaa
acactcggcctgtctgtcgacatcgtcgacggcatcgagttcgatcacggatacacctcc
gggtacatggtcaccgatccggagcggatggaggcggtgcacgtcgatccgctgatcctg
ttgaccaacaagaagatcacccaggtgcaggagatcatgcccagcatcgaggcggccaag
cgtgccgaccgaccgctggtcgtgctcgccgaggaggtcgacgggccggcgttacagctg
ctcgtcggcggcaacatgcacaagacgatgcagtcggtcgtcgtccgagcacccggattc
gggcaccgcagggtcgccgagctggaggacctggccgtcgcgctgggcggacatgtcgtg
gcgaaagacaccggactcgaactgtcggaggtaacgatcgagcacctggggtcgtgcgat
cgaatcaccgtgaccgagaaccagaccaccatcgtcgggggccatggcgatcaggctctg
ttggtcgcgcgggtagctcagctgaagacccaacgtgaacgcgcgaagatcgacgccgat
cgcgagagcatcgacctccgcatcgcccgcctcaccggcagggttgcggtgatccgcgtc
ggcggtgccacgagcgtggaactcaaggagcgcatgttgcgggtcgaggatgcgctcgcc
gccacccaggcagcggtggaggaggggatcgtcgcgggtggcggcaccgccttggcacag
tcgcactgggcactcgcggacctggtgctgccgggtgacgaagcagtgggctgcgacgtg
gtgcggcgtgcgctcgccgaaccggtgcggtggatcgccgtcaacgcgggattcgacggc
gacgaggtcgtcgacacggtcgtcgacctgcccctcggacacggcttcaacgccctcacc
ggcgcctacgaggacatgttcgacgacggcgtcatcgacccgttcaaggtcacccgagcg
gcgttggagagcgcggcatccatcgcggcattgctgatcaccaccgagaccgccgtggtg
gaggaggtcgtcgggaatcccggggccgttctcgctcccggcttcggtgatctcgccgag
ggcatggtccgcccgtcgaacatctattga
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