Nocardia farcinica NCTC11134: ERS450000_02200
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Entry
ERS450000_02200 CDS
T04524
Symbol
uvrA_2
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ERS450000_02200 (uvrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfr03400
]
ERS450000_02200 (uvrA_2)
DNA repair and recombination proteins [BR:
nfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ERS450000_02200 (uvrA_2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ERS450000_02200 (uvrA_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
AAA_29
SMC_N
AAA_21
RsgA_GTPase
AAA_16
AAA_25
DnaJ_CXXCXGXG
ScfRs
ExoX-like_C
NACHT
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
CRY77161
UniProt:
A0A0H5P3U8
LinkDB
All DBs
Position
1:complement(2199011..2202037)
Genome browser
AA seq
1008 aa
AA seq
DB search
MAERLTVRGAREHNLKGVDLDLPRDSMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH
CPVCGHLIAKQTPQQIVDQVLEMPEGTKFQVLAPVVRTRKGEFVDLFDQLNTQGYSRVRV
DGVVYPLTDPPKLKKQEKHDVEVVVDRLTVKPSSKQRLTDSIETALRLADGIVVLDFVDR
DENAHDRERRFSERLACPNGHPLDIEDLEPRSFSFNSPYGACPDCAGLGIRKEVDPDLVV
PDPELSLAEGAIAPWSRGQTAEYFTRLLTGLAEAIGFSMDTPWKDLPAKARKAVLEGSSD
QVHVSYTNRYGRKRSYYADFEGVMPFLHRRMDNTESEQMKEHYEGYMRDIPCPVCKGARL
RPEILAVTLAAGSEKKSIAEVSDLSIGDCSAFLNGLTLGEREAAIAGQVLKEVQARLGFL
LDVGLEYLTLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIET
LTRLKNLGNTLIVVEHDEDTIRASDWVVDIGPLAGEHGGRVVHSGPYPDLLANTDSLTGA
YLAGHKRIEVPMVRRPIDRKRKLTVVGATEHNLKGIDVSFPLGVLTSVTGVSGSGKSTLV
NDILATVLANKLNGARQVPGRHTRVNGLDQLDKLVRVDQSPIGRTPRSNPATYTGVFDKI
RTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCHGARY
NRETLEVHYKGKTIAEVLDMPIEEAAEFFEPVTSIHRYLKTLVDVGLGYVRLGQPAPTLS
GGEAQRVKLAAELQKRSAGRTIYILDEPTTGLHFEDIRKLLAVINGLVDKGNTVIVIEHN
LDVIKTSDWVIDMGPEGGSGGGTVVAEGTPEDVAAVPDSYTGQFLKEVLAQAETAPAPKS
AAAKQAAAKKAAAKKAAGESGTVKKRTVPAPPETAAAKRLARKAAALR
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
gtggcggaacgcctcactgtgcgcggagctcgggagcacaacctgaagggggtcgacctc
gatctgccccgcgacagcatgatcgtgttcaccggtctgtccggatcgggaaaatcgagc
ctcgccttcgacaccatcttcgccgaggggcagcgccgctacgtggaatcgctgtcggcc
tacgcccggcagttcctgggccagatggacaagcccgacgtcgacttcatcgagggcctc
tcacccgcggtgtcgatcgaccagaagtccaccaaccgcaacccgcgctccaccgtcggc
accatcaccgaggtctacgactacctgcgcctgctctacgcccgcgcgggtacgccgcac
tgcccggtctgcggtcacctcatcgccaagcagaccccgcagcagatcgtcgaccaggtg
ctggagatgcccgagggcaccaagttccaggtgctcgcgccggtggtgcgcacccgcaag
ggcgagttcgtcgacctgttcgaccagctcaacacccagggctattcgcgggtgcgggtc
gacggcgtggtgtatccgctcaccgatccgcccaagctgaagaagcaggagaagcacgac
gtcgaggtggtcgtcgaccgcctcaccgtcaagccgagctccaagcagcgcctgaccgac
tccatcgagacggcgctgcggctggccgacggcatcgtggtgctcgacttcgtcgaccgt
gacgagaacgcccacgatcgcgagcgccggttctccgagcggctggcctgtcccaacggg
cacccgctcgacatcgaggatctcgaaccgcgctcgttctccttcaactcgccgtacggc
gcctgcccggactgcgcgggcctgggcatccgcaaggaggtcgatcccgacctggtggtg
cccgatccggagctgagcctggccgagggtgccatcgcgccgtggtcgcgcgggcagacc
gccgagtacttcacccggctgctcaccggcctggccgaggccatcgggttctcgatggac
accccgtggaaggacctgcccgccaaggcgcgcaaggccgtgctcgagggcagctccgac
caggtgcacgtctcctacaccaaccggtacggccgcaagcgctcctactacgccgacttc
gagggcgtgatgcccttcctgcaccggcgcatggacaacaccgagtccgagcagatgaag
gagcactacgagggctacatgcgcgacatcccgtgcccggtgtgcaagggggcgcggctg
cggccggagatcctggccgtcaccctggccgccgggtcggagaagaagtcgatcgccgag
gtcagcgacctgtccatcggtgactgctcggccttcctgaacgggctcaccctgggcgag
cgcgaggccgcgatcgccgggcaggtgctcaaggaggtgcaggcacggctgggcttcctg
ctcgacgtcggcctggaatacctcacgctctcgcgggccgcggcgacgctgtccggcggc
gaggcgcagcgcatccggctggccacccagatcggttccggcctggtcggcgtgctctac
gtgctcgacgagccgtccatcggcctgcaccagcgcgacaaccgccgcctgatcgagacg
ctgacccggttgaagaacctgggcaacaccctgatcgtggtcgagcacgacgaggacacc
atccgcgcctcggactgggtggtcgacatcggcccgctcgccggtgagcacggcggccgc
gtggtgcacagcggcccgtacccggacctgctcgccaacaccgattcgctgaccggcgcg
tacctggccgggcacaagcggatcgaggtgccgatggtgcgccgcccgatcgaccgcaag
cgcaagctcaccgtcgtgggtgcgaccgagcacaacctcaagggtatcgacgtctcgttc
ccgctcggcgtgctcacctcggtgaccggcgtgtccggctcgggtaagtcgacgctggtc
aacgacatcctggccaccgtgctggcgaacaaactcaacggcgcccgccaggtgcccggc
aggcacacccgggtcaacgggctggaccagctcgacaagctggtgcgggtcgaccagtcg
ccgatcgggcggaccccgcgctccaacccggccacctacaccggcgtcttcgacaagatc
cgcacgctgttcgcggccaccaccgaggcgaaggtgcgcggctaccagccgggccggttc
tcgttcaacgtcaagggcggccggtgcgaggcctgctcgggcgacggcacgctgaagatc
gagatgaacttcctgcccgacgtctacgtcccgtgcgaggtgtgccacggcgcgcgctac
aaccgggaaaccctggaggtgcactacaagggcaagaccatcgccgaggtgttggacatg
cccatcgaggaggcggccgagttcttcgagccggtcacctcgatccaccgctacctcaag
accctcgtcgacgtcgggctcggctacgtgcggctcggccagcccgccccgaccctgtcc
ggcggcgaggcccagcgcgtgaagctggccgccgaactgcagaagcggtcggccgggcgc
accatctacatcctcgacgagccgaccaccggcctgcacttcgaggacatccgcaagctg
ctcgcggtgatcaacgggctggtggacaagggcaacaccgtcatcgtcatcgagcacaac
ctggacgtcatcaagacctccgactgggtgatcgacatgggcccggagggcggttccggc
ggcggcacggtggttgccgagggcacgccagaggatgtcgcggcggtgccggacagctac
accggccagttcctcaaagaggtgctggcacaggcggaaaccgcaccggcgcccaagagt
gcggccgcgaagcaggcagccgcgaagaaggcggcggcgaagaaggcggccggggagtcg
ggcacggtgaagaagcggaccgtgcctgctccgccggagacggcggcggccaagcggctg
gccaggaaggcggcggcgttgcgctga
DBGET
integrated database retrieval system
