Nocardia farcinica NCTC11134: ERS450000_02237
Help
Entry
ERS450000_02237 CDS
T04524
Symbol
polA_2
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr03030
DNA replication
nfr03410
Base excision repair
nfr03420
Nucleotide excision repair
nfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ERS450000_02237 (polA_2)
03410 Base excision repair
ERS450000_02237 (polA_2)
03420 Nucleotide excision repair
ERS450000_02237 (polA_2)
03440 Homologous recombination
ERS450000_02237 (polA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfr03032
]
ERS450000_02237 (polA_2)
03400 DNA repair and recombination proteins [BR:
nfr03400
]
ERS450000_02237 (polA_2)
Enzymes [BR:
nfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ERS450000_02237 (polA_2)
DNA replication proteins [BR:
nfr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ERS450000_02237 (polA_2)
DNA repair and recombination proteins [BR:
nfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ERS450000_02237 (polA_2)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ERS450000_02237 (polA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH_2
Motif
Other DBs
NCBI-ProteinID:
CRY77205
UniProt:
A0A0H5NMQ9
LinkDB
All DBs
Position
1:complement(2239420..2242176)
Genome browser
AA seq
918 aa
AA seq
DB search
MPVPRLWVVSSPTTASRSTPAPGAEGGRPTLLLLDGHSLAYRAFFALPAENFKTVTGQTT
NAVYGFTAMLINLLRDEKPTHIAAAFDVSRKTFRTEAYPEYKANRSQTPDEFRGQVELTK
DVLGALGIPVMAIDGFEADDVIATLTTQAKAEGFRILIVTGDRDSIQLVDDDVTVLYPRK
GVSDLTRFTPEEVMTKYGLTPNQYPDYAALRGDPSDNLPGIPGVGEKTAAKWIREYGDLA
TLVDKVDTVKGKVGDALRANLSSVVLNRQLTEMVKDVPLPYTPDQLAQGPWDREKIHRLF
DDLEFRVLRDRLFETLAPPQQEAESGFEISGGALAVGAVADWLAEHAKAGVRHGVSVVGS
GAPARGDVQALAIAAADGESGYIDVTVLTPEDEAALAAWLADPAVPKALHEAKSAMHALR
GRGWTLGGLTSDTALAAYLVRPGQRSFNLDDLSLRYLHRELRAETDDNAQLSLLDDEDAV
DAETARAEMLRARAVLDLAAALDAELEQIESTALLTDMELPLLGVLATLEEAGIAVDCEQ
LEALQRQFADKVAQAAEAAYGVIGKQINLGSPKQLQVVLFDELDMPKTKRTKTGYTTDAD
ALESLFEKTQHPFLEHLLAHRDATRLKVTVDGLLKSVADDGRIHTTFNQTIAATGRLSST
EPNLQNIPIRTDTGRMIRDTFVVGPGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNSGE
DLHSFVASKAFDIPIAEVSPELRRRIKAMSYGLAYGLSSYGLSAQLKISTAEAKEQMDIY
FSRFGRIRDYLYEVVEQARKVGYTETLFGRRRYLPDLDSSNRQRREAAERMALNAPIQGT
AADIIKVAMIDVHRGIREAGLRSRMLLQIHDELVFEVAEGERDALEQLAREKMSAAIALS
VPLDVSVGTGRSWDAAAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
gtgccggtccctagactctgggtggtgagctcaccgacgactgcctcgcgttccactccc
gctcccggcgccgagggcgggcggccgaccctgctgttgctggacgggcactcgctcgcc
taccgcgcgttcttcgccctaccggcggagaacttcaagacggtcaccgggcagaccacc
aacgccgtctacggcttcaccgccatgctcatcaacctcctgcgcgacgagaagcccacg
cacatcgccgcggccttcgacgtctcccgcaagaccttccgcaccgaggcctaccccgag
tacaaggccaaccgcagccagacgccggacgagttccgcgggcaggtcgagctcaccaag
gacgtgctcggcgcgctcggcatcccggtcatggcgatcgacggtttcgaggccgacgac
gtgatcgccacgctcaccacccaggccaaggccgagggtttccgcatcctcatcgtcacc
ggcgaccgcgactcgatccagttggtcgacgacgacgtcaccgtgctctacccgcgcaag
ggcgtctcggacctcacgcggttcactcccgaggaggtgatgaccaaatacggtctcacc
cccaaccagtacccggactacgcggcgctgcgcggcgaccccagcgacaacctgcccggc
attcccggcgtgggggagaagaccgcggcgaagtggatccgcgagtacggcgacctggcc
acgctggtggacaaggtggacaccgtcaagggcaaggtcggcgacgcgctgcgcgccaat
ctgagcagcgtggtgctcaaccggcagctcaccgagatggtcaaggacgtgccgctgccc
tacacgccggatcagctggcgcaggggccgtgggaccgcgagaagatccaccgtctcttc
gacgacctcgagttccgggtgctgcgcgaccgcctgttcgagacgctggcgccgccgcag
caggaggccgagtccgggttcgagatcagcggcggcgcgctggccgtcggcgcggtcgcc
gactggctcgccgaacacgcgaaagccggtgtgcgccacggtgtctcggtggtcggtagc
ggcgcgcccgcgcgcggtgacgtgcaggcgctggccatcgccgccgccgacggcgagagc
ggctacatcgacgtcaccgtgctcacccccgaggacgaggcggcgctggccgcctggctg
gccgacccggcggtgcccaaggcgctgcacgaggccaagtcggccatgcacgcgttgcgc
gggcgcggctggacgctgggcgggctcaccagcgacaccgccctggcggcctatctggtg
cgccccgggcagcgcagcttcaacctcgacgacctctcgctgcgctatctgcaccgcgag
ttgcgcgccgagaccgacgacaacgcccagctctcgctgctcgacgacgaggacgccgtc
gacgccgagaccgcgcgcgcggagatgctgcgcgcccgcgccgtgctcgacctggccgcc
gcgctggacgccgaactcgagcagatcgagtccaccgcgctgctcaccgacatggaactg
ccgctgctcggcgtgctcgccacgctggaggaggcgggcatcgcggtggactgcgagcag
ctcgaggcgctgcaacgacaattcgccgacaaggtcgcccaggccgccgaggccgcctac
ggggtgatcggcaagcagatcaacctcggctcgcccaagcagctgcaggtggtgctgttc
gacgagctcgacatgcccaagaccaagcgcaccaagaccggctacaccaccgacgccgac
gcgctggaatcgctgttcgagaagacccagcaccccttcctggaacatctgctcgcccac
cgcgacgccacccggctgaaggtgaccgtcgacggcctgctcaagtcggtggccgacgac
ggacgcatccacaccaccttcaaccagaccatcgccgcgaccggccggttgtcctccacc
gagccgaacctgcagaacatccccatccgcaccgacaccggccggatgatccgcgacacc
ttcgtggtgggcccgggctacgcggagctgatgaccgccgactacagccagatcgagatg
cgcatcatggcgcacctgtccggcgacgagggcctgatcgaggccttcaactcgggggag
gacctgcacagtttcgtcgcgtccaaggccttcgacatcccgatcgcggaggtgagcccg
gagctgcgccgccggatcaaggccatgtcctacgggctggcctacgggctgagttcctac
gggctgtccgcccagctcaagatcagcaccgccgaggccaaggagcagatggacatctac
ttctcccgcttcggccgcatccgcgactacctgtacgaggtggtcgagcaggctcgcaag
gtcggctacaccgagaccttgttcggtcgccgccgctacctgcccgacctggactcgagc
aaccggcagcgccgcgaggccgccgagcggatggcgctcaacgcgccgatccagggcacc
gcggccgacatcatcaaggtggcgatgatcgacgtgcaccgcggcatccgggaggccggg
ctgcgctcgcggatgctgctgcagatccacgacgaactcgtcttcgaggtggccgagggc
gagcgggacgcgctcgagcagctggcgcgggagaagatgtcggcggccatcgcgctgtcg
gtgccgctggacgtgtcggtgggcaccgggcgcagctgggacgccgccgcgcactga
DBGET
integrated database retrieval system
