Nocardia farcinica NCTC11134: ERS450000_02833
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Entry
ERS450000_02833 CDS
T04524
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ERS450000_02833 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfr03019
]
ERS450000_02833 (orn)
03009 Ribosome biogenesis [BR:
nfr03009
]
ERS450000_02833 (orn)
Messenger RNA biogenesis [BR:
nfr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ERS450000_02833 (orn)
Ribosome biogenesis [BR:
nfr03009
]
Eukaryotic type
Pre-60S particles
RNases
ERS450000_02833 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CRY78255
UniProt:
A0A0H5NR01
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All DBs
Position
1:2897882..2898577
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AA seq
231 aa
AA seq
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MTGVVSQAGTSNVALVSDKLVVWMDCEMTGLRLDSDKLIEVSALVTDSDLNILGDGVDIV
IHADDAALAAMPPVVAEMHARSGLTDEVRRSTVTVAEAEQQVLDYIRQYVPTPRTVPLAG
NSIATDRAFIARDMPALDAHLHYRMIDVSSIKELCRRWYPRIYFGQPEKGLTHRALADIK
ESIRELEYYRRTAFVAPPGPSTAEIAAVAAQLGGTAQTAESPQVEGTTQAD
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcgtggtgtcgcaggcggggaccagtaatgttgcgctggtgtccgacaaactt
gtggtgtggatggattgcgagatgaccgggctgcgcctggacagcgacaagctgatcgag
gtgtccgcgctcgtgaccgacagcgatctcaacattctcggtgacggcgtcgacatcgtc
atccacgccgacgacgcggcgctggcggcgatgccaccggtggtcgccgagatgcacgcc
cgctccgggctcaccgacgaggtccgccgttccacggtcaccgtcgccgaggccgagcag
caggtgctcgactacatccgccagtacgtgcccaccccgcgcaccgtgccgctggcgggc
aactccatcgcgaccgaccgcgccttcatcgcccgcgacatgcccgcgctcgacgcgcac
ctgcactaccgcatgatcgacgtcagctcgatcaaggagctgtgccgccgctggtatccg
cgcatctacttcggccagcccgagaagggcctgacccaccgcgccctcgccgacatcaag
gaatcgatccgcgagctggagtactaccgccgcaccgcgttcgtcgccccgcccggcccc
tccaccgccgagatcgccgccgtggccgcccagctcggcggcaccgcacagaccgccgaa
tcaccgcaggtggagggcaccacgcaggccgattag
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