Nocardia farcinica NCTC11134: ERS450000_03064
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Entry
ERS450000_03064 CDS
T04524
Symbol
lysA_2
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr00300
Lysine biosynthesis
nfr00470
D-Amino acid metabolism
nfr01100
Metabolic pathways
nfr01110
Biosynthesis of secondary metabolites
nfr01120
Microbial metabolism in diverse environments
nfr01230
Biosynthesis of amino acids
Module
nfr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ERS450000_03064 (lysA_2)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ERS450000_03064 (lysA_2)
Enzymes [BR:
nfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ERS450000_03064 (lysA_2)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CRY78706
UniProt:
A0A0H5P827
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All DBs
Position
1:complement(3163414..3164835)
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AA seq
473 aa
AA seq
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MSAHPAGPRHAESSATPHLAQRPVDPKQMIELPANVWPRNATRDEAGQVRLAGVPVRELA
EQFGTPLFVVDEDDFRSRCRDMVRAFGPDARVHYASKAFLCGEIARWLRDEGLSLDVCSG
GELAIALHAGFPAERIALHGNNKSVAELEAAVAAGVGHVVVDSLIEIERLEAVAERAGVV
QDVLVRVTVGVEAHTHEYISTAHEDQKFGFSIAGGDAMEALARVFDASNLRLVGLHSHIG
SQIFEIDGFEIAARRMLGLLRAAIDTFGVERTAQISTLDLGGGLGISYLPEDNPPPLDEF
AAKLRAIVAEEAARAGLPEPTIAVEPGRAIAGPGTVTVYEVGTIKDVSLDAGLRRRYVSV
DGGMSDNIRPALYQADYDCRLVSRPSEAEAVLARVVGKHCESGDIVIRDTWMPADVGPGD
LIAVAATGAYCYSMSSRYNQLTRPAVVAVRDGSARLVLRRETVADLLSLEVES
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgcaccccgccggtccccggcatgccgaatcgagcgccaccccccatctggcg
caacggccggtcgacccgaagcagatgatcgagctgcccgccaacgtctggccgcgcaac
gccacccgcgacgaggcgggccaggtgcggctggcgggtgtgccggtgcgcgaactggcc
gagcagttcggcacgccgctgttcgtggtcgacgaggacgacttccggtcgcgctgccgc
gacatggtgcgcgccttcggccccgacgcgcgggtgcactacgcctccaaggcgttcctg
tgcggggagatcgcgcgctggctgcgtgacgagggcctctcgctggacgtgtgctccggc
ggtgagctggcgatcgcgctgcacgcgggctttcccgcggagcggatcgcgttgcacggc
aacaacaaatcggtcgccgagctggaagcggcggtcgccgcgggcgtcggccacgtggtg
gtcgactcgctgatcgagatcgagcggctcgaggcggtcgccgagcgcgcgggcgtggtg
caggacgtgctggtgcgtgtcaccgtcggcgtggaggcccacacccacgagtacatctcg
accgcgcacgaggaccagaagttcggcttctcgatcgcgggcggcgacgcgatggaggcg
ctggcgcgcgtgttcgatgcgagcaacctgcgcctggtcggcctgcattcgcacatcggc
tcgcagatcttcgagatcgacggcttcgagatcgccgcgcggcgcatgctcggcctgctg
cgcgcggccatcgacaccttcggcgtcgagcgcaccgcgcagatctccaccctggatctc
ggtggcggtctcggcatctcctacctgcccgaggacaacccgccgccgctggacgagttc
gccgcgaagctgcgcgcgatcgtcgccgaggaggcggcccgcgccggcctgcccgagccg
accatcgcggtcgagcccggccgtgccatcgccggacccggcaccgtgaccgtgtacgag
gtcggcaccatcaaggacgtctcgctcgacgccgggctgcgtcgccgctacgtcagcgtg
gacggcggcatgagcgacaacatccggcccgcgctctaccaggccgactacgactgccgg
ctggtctcgcggccctccgaggccgaggcggtgctcgcccgcgtcgtcggaaagcactgc
gagagcggcgacatcgtcatccgcgacacgtggatgcccgccgatgtcggccccggtgac
ctcatcgcggtggccgccacgggcgcgtactgctattccatgtccagccggtacaaccag
ctgacgcgtccggcggtcgtcgccgtgcgcgacggcagcgcccggctggtgctgcgccgg
gagacggtggcggatctgctgagtctggaggttgagtcatga
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