Nocardia farcinica NCTC11134: ERS450000_03184
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Entry
ERS450000_03184 CDS
T04524
Name
(GenBank) Ribonuclease precursor
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
nfr
Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfr03019
]
ERS450000_03184
03016 Transfer RNA biogenesis [BR:
nfr03016
]
ERS450000_03184
Enzymes [BR:
nfr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
ERS450000_03184
Messenger RNA biogenesis [BR:
nfr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ERS450000_03184
Transfer RNA biogenesis [BR:
nfr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
ERS450000_03184
Prokaryotic type
ERS450000_03184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
New_glue
Motif
Other DBs
NCBI-ProteinID:
CRY78921
UniProt:
A0A0H5P8L5
LinkDB
All DBs
Position
1:complement(3285601..3286071)
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AA seq
156 aa
AA seq
DB search
MSPKMLRLVGALGALAVVVLISVLTTRGSDTAPSAISATATPAAGASSTGKPAAPVTSPT
RVAGVPERAYTTLAEIDAGRWPDSANAPGTKGGERWMNRDGDLPRADAAGRAITYQEWDV
NPKQRNRTRDAERIVTGSDGSAWYTGDHYQTFTRMR
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgaagatgcttcgactggtgggggccttgggtgccctggcggtggtggtgctg
atctccgtcctcaccacccgcggctcggacaccgcgccgagcgcgatctcggccaccgcg
acgcccgcggcgggtgcgagctcgaccggcaagcccgcggctccggtcacctcgccgacg
cgggtggcgggcgtgcccgagcgggcctacaccacgctcgccgagatcgatgcgggccgc
tggccggattcggcgaacgcgccgggcaccaagggtggggagcggtggatgaaccgcgac
ggtgatctgccgcgcgccgatgcggcgggcagggcgatcacctaccaggagtgggacgtc
aatcccaagcaacgcaaccggacccgggacgccgaacgcatcgtcaccggcagcgacggt
tcggcctggtacaccggcgaccactaccagaccttcacgaggatgcgctga
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