Nocardia farcinica NCTC11134: ERS450000_03368
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Entry
ERS450000_03368 CDS
T04524
Symbol
rluA_1
Name
(GenBank) Ribosomal large subunit pseudouridine synthase A
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
nfr
Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nfr03009
]
ERS450000_03368 (rluA_1)
03016 Transfer RNA biogenesis [BR:
nfr03016
]
ERS450000_03368 (rluA_1)
Enzymes [BR:
nfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
ERS450000_03368 (rluA_1)
5.4.99.29 23S rRNA pseudouridine746 synthase
ERS450000_03368 (rluA_1)
Ribosome biogenesis [BR:
nfr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ERS450000_03368 (rluA_1)
Transfer RNA biogenesis [BR:
nfr03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
ERS450000_03368 (rluA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
fvmRadSAM-pep
Motif
Other DBs
NCBI-ProteinID:
CRY79187
UniProt:
A0A0H5NUM2
LinkDB
All DBs
Position
1:3510308..3511237
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AA seq
309 aa
AA seq
DB search
MRRRQQPPLPKRHGLDPARLRLPEAGEWATIRDHLVHRLPRVAPERIDELLRAGAIVDLD
GPIAPDAPYVPGGAVWFHRDLPDEVEVPFDLTVVHRDETVLVVDKPHFLATIPRGQHIRQ
TALVRLREQLGLPDLVPAHRLDRVTAGLILFVVDPARRGAYQTMFHRRTVRKQYEAIAPY
DPELALPRVVRSRIVKEKHVLAAREVEGEPNAETLVELLEHRDGLGRYRLTPHTGRTHQL
RLHMNSLGVPILGDDFYPVLTDKPVHEFTRPLQLLAAVLEFTDPVTGEPRRFETTRSLQA
WTDYPGWAG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcaggcagcagccaccgttgccgaaacggcacggcctcgatcccgcccggctg
cggctgccggaagcgggcgagtgggcgaccatccgcgatcatctggtgcaccggctgccc
cgcgtcgcacccgagcgcatcgatgaactgctgcgggcgggcgcgatcgtcgatctcgac
ggtccgatcgcccccgacgcaccgtatgtgcccggcggcgcggtgtggttccatcgcgat
ctgcccgacgaggtcgaggtgccgttcgacctgaccgtcgtgcaccgcgacgagaccgtg
ctggtggtcgacaagccgcatttcctcgccacgatcccgcgcggtcagcacatccgccag
accgcgctggtgcggttgcgcgaacagctcggcctgcccgatctggtgcccgcgcaccgg
ctggaccgggtgacggccgggctgatcctgttcgtcgtcgatccggcccgccgcggcgcc
taccagacgatgttccaccggcgcaccgtgcgcaagcagtacgaagccatcgcgccctac
gatccggagctcgcgctgccccgtgtggtgcgcagccggatcgtgaaggagaaacacgtg
ctcgcggcccgggaagtcgagggcgagccgaacgccgagaccctggtcgaactgctcgag
caccgcgacgggctcggtcgctaccggctcaccccacacaccggccgcacccatcaactg
cgcctgcacatgaacagcctcggcgtgccgatcctcggcgacgacttctatccggtgctc
accgacaagccggtccacgaattcacccggcccctgcaactgctggcggcggtgctcgaa
ttcaccgatccggtcaccggcgagccgcgccgcttcgagaccacccgctcgttgcaggcg
tggaccgactaccccggctgggcgggctag
DBGET
integrated database retrieval system
