Nocardia farcinica NCTC11134: ERS450000_03561
Help
Entry
ERS450000_03561 CDS
T04524
Name
(GenBank) Neutral ceramidase precursor
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr00600
Sphingolipid metabolism
nfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
ERS450000_03561
Enzymes [BR:
nfr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
ERS450000_03561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
MarR
MarR_2
Ceramidse_alk_C
Staph_reg_Sar_Rot
HTH_27
Motif
Other DBs
NCBI-ProteinID:
CRY79901
UniProt:
A0A0H5PBC5
LinkDB
All DBs
Position
p2:complement(65481..68309)
Genome browser
AA seq
942 aa
AA seq
DB search
MTRTIEGEQRAGLDRRTLLARSAVGTVALATAGTVGTVGQGVAAAPALAAPDSGYRVGLG
ISDITGPAAECGMMGYSQFGQDTAGIHLRPRARAFVFEAGAARVVFAVAENGMIVQSVHR
GVLLELARRFGDRYTEQNVLLTSTHSHATCGGASHDYAYNLSVLGFQQQVYDAEVQGIVE
AIVAAHEDLSPATLALGRAELHDASVNRSRVAFERNPAEDRAHFPGAIDPAVTALSIRKG
GREVGAITWFATHNTSMTNQNRLISSDNKGYAAFAHEHIEHGVRYLDGAPEFIAAFAQTN
AGDMSPNLNLRPGSGPTDDEFANTRIIGERQHAASKAALAQAAPVRGPVQSLLCYIDLAD
IAVDGRFTPDGQPRRTAPAAAGVSLIAGSVEDGPGLPGAPIPEGVRNPLIDALGDPRRPA
PSWLADAQAPKVIAAPLGLLPPVPWVPNVVPIQLVRIGELYLAAAGGEFTIVAGLRVRRA
VAAALGVDLEQVLLQGYANAYHQYVTTPEEYDAQQYEGGSTLFGRYTLPAYQQEFTRLAT
ALATDGTVARGPAPRDVSHLQPNLVPAPGPDTALPDLTFGDVLVQPAPGYARASRWWPSS
SRPTRNTTRAATAPSSRCSAGRRTAGCAWPTRGSGRSASTGARPARPPRSPGSPGTFPPT
PHRADTGSCTSPVGSPPTAAGIRSPASPTNSTSRERSEPGLGALVPAPGGAALNQEDHQA
DQADDQAHDAHRASGLPPRAADPDHDQRDQPQQAADGEHGPRVGQPRRDLRHVRGHHPSV
AGQIVRSDAGGSRIVWRVTTPSDVRALAGELSLAVVRLTRHLRGRRTDSPVSLTQLSALA
TLAREGAMTPGALAAKERVQPPSMTRVIASLSDLKLVERKPHPTDGRQIIVSLSESGRAL
IADEASAREAWMTEQLSGLTGEQLDVLEQAVAIMKQIVAESE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggacgatcgagggcgaacagcgcgcgggactggaccgccgaaccctgctggcg
cgcagcgcggtcggcacggtcgcgcttgccacggccgggacggtcggcacggtcggccag
ggcgtcgccgccgcgcccgcgctcgccgcacccgattccggataccgggtcgggctcggc
atctccgacatcaccggtcccgccgctgagtgcggcatgatgggctactcgcagttcggc
caggacaccgcgggcatccacctgcggccgcgggcccgcgcgttcgtcttcgaggcgggt
gcggccagggtggtgttcgcggtcgcggagaacgggatgatcgtccagtcggtgcaccgc
ggcgtgctgctggaactggcccgtcgcttcggcgaccgctacaccgagcagaacgtgctg
ctcacctccacccactcgcacgccacctgcggcggcgccagccacgactacgcctacaac
ctgtcggtgctcggcttccagcagcaggtctacgacgccgaggtgcaggggatcgtcgag
gcgatcgtcgccgcgcacgaggatctctccccggccaccctcgcgctcggccgggccgaa
ctgcacgacgcgagcgtcaaccgctcccgggtggcgttcgaacgcaatccggccgaggac
cgggcgcacttccccggcgccatcgatccggcggtcaccgcactgtcgatccgcaagggc
ggcagggaggtcggggcgatcacctggttcgccacccacaacacctcgatgaccaatcag
aaccggctgatcagctccgacaacaagggctatgccgccttcgcgcacgagcacatcgag
cacggcgtgcgatacctcgacggcgcaccggaattcatcgccgccttcgcccagaccaac
gcgggcgacatgtcaccgaacctgaacctgcgccccggttccgggcccaccgacgacgag
ttcgccaacacccggatcatcggcgaacgccagcacgcggcctcgaaagccgcactggcc
caggccgctccggtgcgcgggccggtccagtcgctgctgtgctacatcgacctggccgac
atcgccgtcgacggccggttcaccccggacgggcagccgcggcgcaccgcgcccgccgcc
gcgggcgtctcgctgatcgcgggcagtgtggaggacggtcccgggctgcccggcgcgccc
atccccgagggcgtgcgcaatccattgatcgacgcgctcggcgacccccgtcgccccgca
ccgtcctggctggcggatgcccaggcccccaaggtcatcgccgccccgctcggactgctg
ccgccggtgccgtgggtgccgaacgtggtgccgatccagctggtgcgcatcggcgagctg
tacctggcggccgcgggcggtgagttcaccatcgtggcggggttgcgggtgcgccgcgcg
gtcgccgccgcgctcggtgtcgacctcgagcaggtgctgctccagggctacgccaatgcc
taccaccagtacgtcaccacgcccgaggagtacgacgcccagcagtacgagggcggctcg
acgctgttcggccgctacacactgcccgcctatcagcaggaattcacccggctggcaacg
gctttggccaccgacggcacggtcgcgcgcggcccggccccgcgcgacgtgtcccacctg
caaccgaatctggtgcccgcacccggaccggacaccgccctgcccgacctgaccttcggc
gacgtgctcgtccagcccgcgcccggctacgcgcgggcgagcaggtggtggccgagttcg
tctcggcccacccgaaacacgacacgcgccgcaacggcaccttcctcgaggtgcagcgcc
ggacggcggacggctgggtgcgcgtggccaacgagggggagtgggcggtccgcttccact
ggcgcaagaccggcacggccacctcgatcgcccggttcacctgggacattcccgccgacg
ccgcaccgggccgataccggttcgtgcacttcgccggtcggctcgcccccgacggcagca
ggcatccggtcaccggcgtcaccgacgaattcgacatcgcgtgagcgctcagagcccggt
ctgggcgcccttgtccccgcgccgggcggcgcggcgttgaatcaggaagatcaccaggcc
gatcaggccgacgaccaggcccatgacgcacaccgggcgagcggcctcccaccgcgggcc
gccgacccagaccacgaccagcgcgaccagccacagcaggctgccgacggcgagcacggg
ccgcgggtcggtcagccgcggcgggatctgcggcacgttcggggtcaccaccccagcgta
gcgggacagatcgtgcgcagcgacgccggcggttcccgtatcgtttggcgggtgacgacg
ccatcggatgtgagagccctggccggcgagctgtcgctggcggtggtccggctcacgcgg
catctgcgcggtcgccgcaccgattcgccggtgtcgctgacgcagctctccgcgctggcc
acgctcgcccgcgagggcgcgatgacaccgggcgcgctggcggccaaggaacgggtgcag
ccgccgtcgatgacgcgggtgatcgcctcgctgtcggatctgaagctggtggagcgcaag
ccgcatcccaccgacggccgccagatcatcgtctcgctctcggagtcgggccgcgccctg
atcgccgacgaggccagtgcccgcgaggcatggatgaccgagcagctgtccggcctcacc
ggcgaacagctcgacgtgctcgagcaggcggtggcgatcatgaagcagatcgtcgccgag
tcggagtag
DBGET
integrated database retrieval system
