Nocardia farcinica NCTC11134: ERS450000_03706
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Entry
ERS450000_03706 CDS
T04524
Symbol
fadD_7
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr00061
Fatty acid biosynthesis
nfr00071
Fatty acid degradation
nfr01100
Metabolic pathways
nfr01212
Fatty acid metabolism
nfr02024
Quorum sensing
nfr04146
Peroxisome
Module
nfr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ERS450000_03706 (fadD_7)
00071 Fatty acid degradation
ERS450000_03706 (fadD_7)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ERS450000_03706 (fadD_7)
09145 Cellular community - prokaryotes
02024 Quorum sensing
ERS450000_03706 (fadD_7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nfr01004
]
ERS450000_03706 (fadD_7)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfr04147
]
ERS450000_03706 (fadD_7)
Enzymes [BR:
nfr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ERS450000_03706 (fadD_7)
Lipid biosynthesis proteins [BR:
nfr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ERS450000_03706 (fadD_7)
Exosome [BR:
nfr04147
]
Exosomal proteins
Exosomal proteins of breast milk
ERS450000_03706 (fadD_7)
Exosomal proteins of breast cancer cells
ERS450000_03706 (fadD_7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
CRY80144
UniProt:
A0A0H5NYL9
LinkDB
All DBs
Position
p2:complement(209489..211042)
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AA seq
517 aa
AA seq
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MTTQESEILGLWNIADAEPDRIALVDPSGREVTYRELATLANRYATGLRDLGLRTGDVLV
SMVHNCVEAIAAYFAAYQSGLYIVAVNWHLTGPEVAYILSDSEAKAFFADERFAAAAEAA
ADEAGLPASARFSVGEINGFTPLSELGNADAGRPDDRTTGAPMLYTSGTTGRPKGVRRPL
TGADPDVVSPANTSFFALFGLQPYDDHVHICGSPLYHTAVLNFATISIQLGHKVVLMDKW
DAEEMLRLIEKHRVTHSHMVPTQFHRLLALPDEVRAKYDVSSLRSMVHGAAPCPEETKRR
MLEWWGPTVTEYYAATEGGGTVISGAEWLRKPGSVGKAWPYSVIKVLSEEDGSELPPGET
GLVYMKMGASSFEYHHDKTKTEESRVGDLFTVGDIGYLDEDGYLYLCDRRSDLILSGGVN
IYPAEIETVLITHPKVADVAVFGIPHEDWGQEVKAVVQPAEGVEADAALTEELLAFAATR
LAKYKMPRSIDYLDELPRDPNGKLYKRKLRERYVPAS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacgcaggagtcagaaattctcggtctttggaacatcgcggacgccgaacccgat
cggatcgcgttggtcgatccgtcgggacgggaggtgacctatcgcgaactggccacgctc
gccaaccggtacgccacaggtctacgtgacctcggcctgcgcaccggcgacgtgctggtg
agcatggtgcacaactgcgtcgaggccatcgcggcctacttcgcggcctaccagtccggc
ctctacatcgtggcggtgaactggcatctcaccggtcccgaggtggcctacatcctctcc
gacagcgaggccaaggcgttcttcgccgacgagcgcttcgccgccgcggccgaggcggcc
gcggacgaggccggattgccggcctcggcccggttctcggtcggcgaaatcaacggcttc
acaccgctttccgagctcggcaacgccgacgccggccgcccggacgaccgcaccaccggc
gcgccgatgctctacacctccggaaccaccgggcggcccaagggcgtccgccgcccgctc
accggggccgacccggacgtcgtgtccccggccaacacctcgttcttcgcgctgttcggg
ctacagccctacgacgaccacgtgcacatctgcggttcaccgctgtaccacacggcggtg
ctgaacttcgcgaccatctcgatccagttgggccacaaggtggttctgatggacaaatgg
gacgccgaggagatgttgcggctcatcgagaaacaccgggtgacccacagccacatggtg
cccacccagttccaccggctgctcgcactgcccgacgaggtgcgcgccaagtacgacgtc
tcctcgctgcgcagcatggtgcacggcgccgcgccgtgcccggaggagaccaagcgcagg
atgctcgagtggtgggggccgacggtcaccgagtactacgcggccaccgagggcggcggc
accgtcatcagcggtgcggagtggttgcgcaagcccggctcggtcggcaaggcgtggccg
tactcggtgatcaaggtgctcagcgaggaggacggctcggagctgccgccgggggagacc
ggtctggtgtacatgaagatgggcgcctccagcttcgagtaccaccacgacaagaccaag
accgaggagtcgcgggtcggcgacctgttcaccgtcggcgacatcggctacctggacgag
gacggctacctctacctctgcgaccggcgctcggacctgatcctctccggcggggtgaac
atctacccggccgagatcgaaaccgtgctcatcacccaccccaaggtggccgacgtcgcg
gtcttcggtatcccgcacgaggattggggccaggaggtcaaggccgtggtgcagcccgcc
gagggcgtcgaggccgacgcggcactcaccgaggaactgctcgccttcgccgccacccgc
ctggccaagtacaagatgccccgctccatcgactacctcgacgagctcccgcgcgacccc
aacggcaagctctacaagcgcaagctgcgggaacggtacgtccccgcctcctga
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