Nocardia farcinica NCTC11134: ERS450000_03821
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Entry
ERS450000_03821 CDS
T04524
Symbol
clpC_1
Name
(GenBank) Probable ATP-dependent Clp protease ATP-binding subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
nfr
Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
nfr03110
]
ERS450000_03821 (clpC_1)
Chaperones and folding catalysts [BR:
nfr03110
]
Heat shock proteins
HSP100
ERS450000_03821 (clpC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
TniB
UVR
ATPase_2
bpMoxR
nSTAND3
AAA_24
IstB_IS21
RsgA_GTPase
NACHT
DNA_pol3_delta2
AAA_19
NBD_SMAX1
Torsin
AAA_23
PEPCK_ATP
Motif
Other DBs
NCBI-ProteinID:
CRY80367
UniProt:
A0A0H5NY04
LinkDB
All DBs
Position
p2:complement(317399..319954)
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AA seq
851 aa
AA seq
DB search
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR
SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA
AQVLVKLGADLNRVRQQVIQLLSGYQGKEPVESGARGETGTPSTSLVLDQFGRNLTQAAL
EGKLDPVIGRSKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGEVPETLK
DKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAID
AASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTINILKGLR
DRYEAHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLRE
FDDKIADARREKESAIDAQDFEKAARLRDKEKQLVAKRAEREKQWRSGDLDVVAEVDDEQ
IAEVLANWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPK
RPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVG
YEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNTLLQVLEDGRLTDGQGRTVDFKNTVLI
FTSNLGTQDISKAVGLGFSQSNNEGSNYERMKLKVNDELKKHFRPEFLNRIDDVIVFHQL
TNEQIVEMVDLMIGRVATQLKNKDMAIELTPTAKNLLAKRGFDPVLGARPLRRTIQREIE
DQLSEKILFGEIGPGQTILVDVEGWDGEGSGEDAKFTFTGKAKLTKAPTEEKPEVVLTGA
AEGPSEAAAGE
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagaggttcaccgaccgcgcgaggcgcgtcgttgtcctggcccaagaagaggcc
cggatgctcaaccacaactacatcggcaccgagcacatcctgcttggcctgatccatgag
ggtgaaggtgtcgcggccaagtcgctggagtccctcggcatttcgctcgagggtgtgcgc
agccaggtcgaggagatcatcggtcagggccagcaggccccgtccgggcacatccccttc
accccgcgcgccaagaaggtgctggagctgagcctgcgcgaggcgctgcagctcggccac
aactacatcggcaccgagcacatcctgctcggcctcatccgcgagggcgagggcgtggcg
gcccaggtgctggtcaagctcggcgccgacctgaaccgggttcgtcagcaggtcatccag
ctgctgtcgggctaccagggcaaggagccggtggagtcgggcgcgcgtggcgagacgggc
accccgtccacctcgctggtgctcgaccagttcggccgcaacctcacccaggccgcgctc
gagggcaagctcgacccggtgatcggccgctcgaaggagatcgagcgggtcatgcaggtg
ctcagccgccgcaccaagaacaacccggtgctgatcggcgagcccggcgtcggcaagacc
gccgtcgtcgagggcctggcgcaggccatcgtcaacggcgaggtgcccgagaccctcaag
gacaagcagctctacaccctcgacctcggttcgctggtcgcgggcagccgctaccgcggt
gatttcgaagagcgcctgaagaaggtgctcaaggagatcaacacccgcggcgacatcatc
ctgttcatcgacgagctgcacacgctggtcggtgccggtgccgccgagggcgcgatcgac
gccgcctccatcctcaagccgaagctggcccgcggcgagctgcagaccatcggcgccacc
accctcgacgagtaccgcaagtacatcgagaaggacgccgccctggagcgccgcttccag
ccggtgcaggtgggcgagccgaccgtcgagcacaccatcaacatcctcaagggcctgcgc
gaccgctacgaggcgcaccaccgggtgtccatcaccgacggcgcgctggtcgccgccgcc
accctggccgaccggtacatcaacgaccggttcctgccggacaaggcgatcgacctgatc
gacgaggcgggcgcgcgcatgcgcatccgccggatgaccgcgccgccggacctgcgcgag
ttcgacgacaagatcgccgacgcgcgccgggagaaggagtccgcgatcgacgcgcaggac
ttcgagaaggccgcgcgcctgcgcgacaaggagaagcagctcgtcgccaagcgcgccgag
cgggagaagcagtggcgctccggtgacctggacgtcgtggccgaggtcgacgacgagcag
atcgccgaggtgctggccaactggaccggtatcccggtgttcaagctcaccgaggaggag
accacccgtctgctccgcatggaggacgagctgcacaagcggatcatcggccaggaggat
gcggtcaaggccgtgtccaaggccatccgccgcacccgcgccggcctgaaggatccgaag
cgtccgtccggctcgttcatcttcgccggcccgtccggtgtcggtaagaccgagctgtcc
aaggcgctggcgaacttcctgttcggcgacgacgacgcgctcatccagatcgacatgggc
gagttccacgaccgcttcaccgcctcgcggctgttcggtgcccctccgggctacgtcggc
tacgaggagggcggccagctcaccgagaaggtgcgccgcaagccgttctcggtcgtgctg
ttcgacgagatcgagaaggcccaccaggagatctacaacaccctgttgcaggtcctcgag
gacggccgcctcaccgacggccagggccgcacggtcgacttcaagaacacggtgctgatc
ttcacctcgaacctcggcacgcaggacatctcgaaggcggtcggcctcggcttctcgcag
tcgaacaacgagggctcgaactacgagcggatgaagctcaaggtcaacgacgagctgaag
aagcacttccggcccgagttcctcaaccgcatcgacgacgtgatcgtcttccaccagctc
accaacgagcagatcgtcgagatggtggacctgatgatcggccgcgtcgccacgcagctg
aagaacaaggacatggcgatcgagctcaccccgaccgccaagaacctgctcgccaagcgt
ggcttcgaccccgtgctcggtgcccggccgctgcgccgcaccatccagcgcgagatcgag
gaccagctgtcggagaagatcctcttcggcgagatcggccccggccagaccatcctggtc
gatgtcgagggctgggacggcgaaggctccggcgaggacgccaagttcaccttcaccggc
aaggcgaagctgaccaaggcccccaccgaggagaagcccgaggtcgtcctcaccggcgcc
gccgaaggcccctccgaagccgccgccggcgagtaa
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