Nocardia farcinica NCTC11134: ERS450000_03882
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Entry
ERS450000_03882 CDS
T04524
Name
(GenBank) ATP-dependent helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
nfr
Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
ERS450000_03882
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GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
ResIII
Motif
Other DBs
NCBI-ProteinID:
CRY80481
UniProt:
A0A0H5PD37
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All DBs
Position
p2:380354..382741
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AA seq
795 aa
AA seq
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MGDAAGADPALGYGRSLLNRVQRGGPDRRLTHAVDLPARPAETTEWPAWVHPDVIAALDT
YGIGAPWTHQTRTAELAAGGQHVVVSTGTASGKSLGYQLPVLTALREDPRATALYLAPTK
ALGADQLRALGELTHEGPLREVHPATYDGDTPAEIRQWVRDNARWIFTNPDMLHVGMLRS
HQRWARVFRRLRYVVVDECHAYRGVFGSHVALVLRRLRRVAAHYGADPVFVLCSATTADP
AAAASRLIGAPCVAVTEDGSPRGARTVALWEPPLTAATGENGAPVRRSATIEAARIMADL
VVEGARTLTFVRSRRGAELAAREARGLLGEVDPRLTERVAAYRAGYLAEDRRELEAALSD
GRLLGAATTNALELGVDIAGLDAVVISGFPGTVASFWQQAGRAGRRSQGSLVLLVATDDP
LDTYLVHHPDALLDKPVEATITDPTNPYVLGPQLLCAAAELPLTDAEAEELGATRVLADL
AAQGRIRRRVAPRTGAGRWHITAHTHPHDDVDVRGGIGAPVAIVDGETGRLLGTADAGRA
PATLHPGAVHLHQGETFVVDELDLTDGVAFVHAADPGWTTSARKLTSLTVESVLAERHHG
GVTSAFAQVCVTSQVIGYLRTLPTGEVMDMVELDLPAQTLPTKAVFYTVTPDLLAEAGID
ARRVPGALHAAEHAAIGLLPLVATCDRWDIGGVSTAEHPDTGLPTVFVYDGQPGGAGFAE
RGFAQLRRWLAATLAAIESCRCATGCPSCVQSPKCGNGNNPLDKDGAARLLRAVLGALDR
TSAAVGAGQGADLTP
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgccgcaggcgccgatccggccctcggctacgggcgatcgttgctgaatcgt
gtccaacggggcggtcctgatcgcaggctcacccacgccgtcgacctgcccgcgcggcct
gccgagaccaccgagtggcccgcgtgggtccaccccgacgtcatcgcggccctggacacg
tacggcatcggcgcaccgtggacacaccagacccgcaccgcggagctggccgcgggcggg
cagcacgtcgtggtcagtaccggcaccgcgtccgggaaatcgctgggataccagctaccg
gtgctcacggcgctgcgggaggacccgcgggcgaccgccctgtacctcgcgccgaccaag
gcgctgggtgccgaccagctgcgcgccctcggcgaactcacccacgagggcccgttgcgc
gaggtccacccggccacctacgacggcgacaccccggccgagatccggcaatgggtgcgc
gacaacgctcgctggatattcaccaacccggacatgctgcacgtcggcatgctgcggtcg
catcagcggtgggcgcgggtgtttcgcagactccgctacgtcgtggtcgacgaatgccat
gcctaccggggcgtcttcggttcacacgtggcactggtgctgcgcaggctgcgccgcgtc
gccgcgcactacggcgccgatccggtgttcgtgctctgctcggccaccacggccgatccg
gcggcggccgcgtcgcggctgatcggcgcgccgtgcgtggcggtgaccgaggacggatcg
ccgcgcggcgcgcgcaccgtagcgctctgggaaccgccgctcaccgccgcgaccggcgaa
aacggtgcacccgttcggcgctcggcgacgatcgaggcggcgcgcatcatggccgacctg
gtggtcgagggcgcgcggacgctgacgttcgtgcggtcgcgccgcggcgccgaactggcc
gcgcgggaggcccgcggactactgggcgaggtcgatccacggctgaccgagcgcgtggcc
gcctaccgagccggctacctggccgaggaccggcgcgaactcgaggcggcgttgtccgac
ggcaggctgctcggcgcggcgacgaccaacgcgctggaactgggcgtcgacatcgcgggc
ctggacgccgttgtcatctcgggtttccccggcaccgtggcctcgttctggcagcaggcg
ggccgcgcgggccggcgtagccaagggtcgttggtgctgctcgtggccaccgacgacccc
ctcgacacgtacctcgtccatcaccccgacgcgctgctggacaagcccgtcgaggccacc
atcaccgaccccaccaacccctacgtgctgggcccccagctgctgtgcgcggccgccgaa
ctcccgctgaccgatgccgaagccgaggagctcggcgccacccgagtcctcgccgacctg
gccgcgcagggccggatcaggcgccgggtcgcgccgcggaccggcgcaggccgctggcac
atcaccgcgcacacccatccacacgacgacgtggacgtgcgcggcggcatcggcgccccc
gtggccatcgtggacggcgagaccggccgtctgctcggcaccgcggatgccggtcgggcc
ccggccaccctgcaccccggcgccgtccacctgcaccagggtgagaccttcgtggtggac
gaactcgacctcaccgacggcgtcgccttcgtccacgcagccgaccccggctggaccacc
agcgcacgcaagctcacctcactcaccgtcgaatcggtactggccgagcgccaccacggc
ggcgtgaccagcgccttcgctcaggtgtgcgtcaccagccaggtgatcggctatctacgg
acgctgcccaccggcgaggtcatggacatggtcgaactcgatctacccgcccagaccctg
cccaccaaagccgtcttctacaccgtcacccccgatctgctggccgaagcgggcatcgac
gcccgccgcgtcccgggggcgctgcacgccgccgagcacgccgcgatcggcctgttgccg
ctggtcgccacctgcgaccgctgggacatcggtggcgtctccacggccgaacaccccgac
accggcctgcccaccgtcttcgtctacgacggccagcccggcggcgccggattcgccgag
cgcggcttcgcccagctgcgccgctggctggcggcgaccctcgccgccatcgagtcctgc
cgctgcgccaccgggtgcccgtcgtgcgtgcagtcccccaagtgcggcaacggcaacaac
ccgctggacaaggacggcgccgcccggctgctgcgggccgtcctcggcgcactcgaccgc
acgtcggcggcggtcggcgcaggtcaaggcgcagatctcacgccgtga
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