Nocardia farcinica NCTC11134: ERS450000_03958
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Entry
ERS450000_03958 CDS
T04524
Symbol
fadB_2
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr00071
Fatty acid degradation
nfr00280
Valine, leucine and isoleucine degradation
nfr00310
Lysine degradation
nfr00362
Benzoate degradation
nfr00380
Tryptophan metabolism
nfr00410
beta-Alanine metabolism
nfr00640
Propanoate metabolism
nfr00650
Butanoate metabolism
nfr00907
Pinene, camphor and geraniol degradation
nfr00930
Caprolactam degradation
nfr01100
Metabolic pathways
nfr01110
Biosynthesis of secondary metabolites
nfr01120
Microbial metabolism in diverse environments
nfr01200
Carbon metabolism
nfr01212
Fatty acid metabolism
Module
nfr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
ERS450000_03958 (fadB_2)
00650 Butanoate metabolism
ERS450000_03958 (fadB_2)
09103 Lipid metabolism
00071 Fatty acid degradation
ERS450000_03958 (fadB_2)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
ERS450000_03958 (fadB_2)
00310 Lysine degradation
ERS450000_03958 (fadB_2)
00380 Tryptophan metabolism
ERS450000_03958 (fadB_2)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
ERS450000_03958 (fadB_2)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
ERS450000_03958 (fadB_2)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
ERS450000_03958 (fadB_2)
00930 Caprolactam degradation
ERS450000_03958 (fadB_2)
Enzymes [BR:
nfr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
ERS450000_03958 (fadB_2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
ERS450000_03958 (fadB_2)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
ERS450000_03958 (fadB_2)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
DAO
F420_oxidored
adh_short_C2
DUF413
NAD_Gly3P_dh_N
PALP
Motif
Other DBs
NCBI-ProteinID:
CRY80626
UniProt:
A0A0H5PDH9
LinkDB
All DBs
Position
p2:complement(459242..461392)
Genome browser
AA seq
716 aa
AA seq
DB search
MSETNMIGWEKDSDGIVVLTMDDPNQGANTMNELYKKSMTATVDRLEAEKDDITGVVLTS
AKKTFFAGGDLKNMMKVGPDDAQALMAELTEIKSALRRLEQLGKPVVAAINGAALGGGLE
IALATHHRIAADVPGSQIGLPEVTLGLLPAGGGIIRTVRMLGLQNALMQVLLQGQRNKPA
KAKEIGLVDELVGSIEELVPAAKAWIKANPDAGVQPWDKKGFKIPGGTPASPGFAANLPA
FPANLRKQLKGANMPAPRAIMAAAVEGSQVDIDNASLIESRYFVHLLTGPVAKNMIQAFF
FDLQAINNGGSRPKDVPKREIKKVGVLGAGMMGAGIAYVSAKAGYEVVLKDVSLEAAERG
KGYSEKIEAKALSRGKTTEEKSKALLDRIKPTADAADFAGVDFVIEAVFENTELKHKVFQ
EIEDIVTPDALLGSNTSTLPITGLATGVKRQEDFIGIHFFSPVDKMPLVEIIKGEKTSDE
ALARVYDYTLAIKKTPIVVNDSRGFFTSRVIGTFVNEAIAMLGEGIEPATIEQAGSQAGY
PAPPLQLSDELNMKLMLKIAKETEEAIKAGDTKLGTERHPAIDVIEWMVGEGRPGRLEKA
GFYEYDENGKRLGLWQGLREHFKTTAGFDVPLQDLIDRMLFAEAIETQKCFDEGVLETTA
DANIGSIFGIGFPAWTGGVHQFIVGYPGGQEAFVARADELAEKYGQRFQVPASLRK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaaaccaacatgatcggttgggagaaggattcggacggcatcgtcgtactgacg
atggacgacccgaaccagggcgccaacacgatgaacgagctgtacaagaagtcgatgacg
gcgaccgtcgaccggctggaggccgagaaggacgacatcaccggtgtcgtgctgacctcg
gcgaagaagaccttcttcgccggtggcgacctgaagaacatgatgaaggtcggcccggac
gacgcgcaggcgctgatggccgagctgaccgagatcaagtcggcgctgcgccggctcgag
cagctcggcaagccggtcgtggccgccatcaacggcgccgcgctgggcggcggcctggag
atcgcgctggcgacccaccaccgcatcgccgcggacgtgccgggctcgcagatcggcctg
cccgaggtgaccctcggcctgctgcccgccggtggcggcatcatccgcaccgtgcgcatg
ctcggcctgcagaacgccctcatgcaggtgctgctgcagggccagcgcaacaagccggcc
aaggccaaggagatcggcctggtcgacgagctggtcggctcgatcgaggagctggtgccc
gccgccaaggcgtggatcaaggccaaccccgacgccggtgtgcagccgtgggacaagaag
ggcttcaagatccccggcggcacccccgccagccccggcttcgcggccaacctgcccgcc
ttcccggccaacctgcgcaagcagctcaagggcgccaacatgcccgccccgcgcgccatc
atggcggccgcggtggagggttcgcaggtcgacatcgacaacgcgtcgctgatcgagtcg
cgctacttcgtgcacctgctcaccggcccggtcgcgaagaacatgatccaggcgttcttc
ttcgacctgcaggcgatcaacaacggcggttcgcgtcccaaggacgtgcccaagcgggaa
atcaagaaggtcggcgtgctcggcgcgggcatgatgggcgcgggcatcgcctacgtctcg
gccaaggccggctacgaggtcgtgctcaaggacgtctcgctggaggcggccgagcgcggc
aagggctactcggagaagatcgaggccaaggccctctcccgtggcaagaccaccgaggag
aagtccaaggcgctgctggaccggatcaagccgaccgcggacgcggccgacttcgccggt
gtcgacttcgtcatcgaggccgtcttcgagaacaccgagctcaagcacaaggtgttccag
gagatcgaggacatcgtcacccccgacgccctgctgggctccaacacctccaccctgccg
atcaccggtctggcgaccggcgtgaagcgccaggaggacttcatcggcatccacttcttc
tcgccggtcgacaagatgccgctggtggagatcatcaagggtgagaagacctccgacgag
gcgctggcccgggtgtacgactacaccctcgccatcaagaagaccccgatcgtcgtcaac
gacagccgtggcttcttcacctcgcgcgtgatcggcaccttcgtcaacgaggcgatcgcc
atgctgggcgagggcatcgagcccgcgaccatcgagcaggccggttcgcaggcgggctac
ccggcgccgccgctgcagctgtccgacgagctcaacatgaagctcatgctcaagatcgcc
aaggagaccgaggaagcgatcaaggcgggcgacaccaagctgggcaccgagcggcacccg
gccatcgacgtcatcgagtggatggtcggcgagggtcgtccgggccgcctggagaaggcc
ggcttctacgagtacgacgagaacggcaagcgcctcggcctgtggcagggcctgcgcgag
cacttcaagaccaccgccggtttcgacgtgccgttgcaggatctgatcgaccgcatgctg
ttcgcggaggcgatcgagacccagaagtgcttcgacgagggtgtgctggagaccaccgcc
gacgccaacatcggctcgatcttcggcatcggcttcccggcctggaccggtggtgtgcac
cagttcatcgtcggctacccgggcggccaggaggccttcgtggcccgcgcggacgagctg
gccgagaagtacggccagcgcttccaggtgcccgcgtcgctgcgtaagtag
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