Nocardia farcinica NCTC11134: ERS450000_04050
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Entry
ERS450000_04050 CDS
T04524
Symbol
ppsA
Name
(GenBank) Beta-ketoacyl-acyl-carrier-protein synthase I
KO
K12437
polyketide synthase 13
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr00074
Mycolic acid biosynthesis
nfr01100
Metabolic pathways
nfr01110
Biosynthesis of secondary metabolites
Module
nfr_M00887
Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
ERS450000_04050 (ppsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nfr01004
]
ERS450000_04050 (ppsA)
Lipid biosynthesis proteins [BR:
nfr01004
]
Polyketide synthase
Modular PKS
ERS450000_04050 (ppsA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
ACP_SdgA_C
Thiolase_N
RhiE-like_linker
CurL-like_PKS_C
DLH
Motif
Other DBs
NCBI-ProteinID:
CRY80802
UniProt:
A0A0H5NZC4
LinkDB
All DBs
Position
p2:complement(556076..561328)
Genome browser
AA seq
1750 aa
AA seq
DB search
MADNEGTPDQTTEDATTDAAATPAPDGAVGEGAVGDGPRTDMSVAEVREWLRRWVADATG
QPLENITVDRPMEEFGLASRDALALGGDIEELTGVVLTATVVYQHPTIASLAEVIVHGEP
EVPETAGDEAFYTAGYTPGEAHDIAIVGLSTRLPGAGDTPESTWEFLINGGDAIRELPEG
RWAEFMSDPNVAKMIEESNTLGGYLDQEVVKGFDAEFFAMSPIEVERVDPQQRLMMELTW
EALEHARIPASELRGESVGMFVGSSTQDFQLIAALGLGDRDPNLPISAEAYALLGASTGI
IANRVSYFFDFRGPSVTVDTACSSTLVAVHQAVRALRDGEADLALAGGVNMILAPVATLG
FEKNGAVAKNGRIKAFSSDADGMVRSEGAGLVVLKRLADAERDGDRILAVIKGTAVNNDG
RSNGLFAPNPDAQADVLRRAYRDAGINPATVDYIEAHGTGTLIGDPIEADALGRVVGRGR
DADKPALLGSAKTNFGHLESGAGVPSLAKVVMAFQHNVIPPNINFAGPNPYIPFEQARLK
VVDEPTQFPRYSGVATVGISGFGFGGANAHVVLQEYTPPTKAAVVAPGTDTDTETETTDV
IAAATAITAEAGDVVAEATEITAEAAADAAEWSAERTEPLPVILCVSGYLPSRRRRAATE
LADWLESEAGRDVPLADVARSLAKRSHWRSRGVVLAKTHEEAVAGLRAIAAGKPGTGVFT
ADAPAAQGPIWVLSGFGAQHRKMGKQLYLENAIFRRTVDEVDELVQDEAGYSVREMILDD
AQDYNVGTSQVGIFTIQIGLAALLRAHGAEPEAVVGHSMGEVAGAYIAGGLTLEDAVRVI
CARSRLMGEGEQMISDDDVRNMALVELSAAEVEAMLTDYPDVEVAVYAAPTNTVIGGPYE
QVQAIVAKVEEAGKFARVLQTRGAGHTSQMDPLLGELAAELAGIEPTRLRAGLYSTVHKE
KYYRPGHDPVHDEDYWVTNMRHSVYFTNAVKLAVDSGHTTFLELAPNSVALMQVLGTTFA
AGLHDAQLIPTLKRKEDESAGVISALAQLYVHGHAVDLSSLLPAGDYADIPRTTFVRKEF
WPAARMATGSGTGRVPGAHVALPDGRHVWEVQASAVTDPAELVRAAAAQVLADVTVGASL
AHGAVPAAGTLTTTLTPHPGGASVQVHAKEDAQFRLIFDAVVTSGAPLPTPAVAAPSTAT
AAAPAAEPEVLEQAGDRWDPNGSQTIEERLALIVAESMGYAVEDLPMEIPLMELGLDSLM
AMRIKNRVEYEFDIPQLQIQAVRDANLTEVGKVLRYAIEHRDQVAAIAEKQAAGEEITVD
ADFVTAARAAMEAGEDPVAALETAVGSQDSGTAADAPAEPAVADPAVADPAPVDQEAAAF
GEALAAVDEDDVPPRDAAERLTYATWAIVTGKSAGGIFNTLPILEEEVAEKLAARLSERI
KAEVTVDDVLDCETIEQLADIVRERQDSGAEIDGFVRPLRPRPEGSDAVPVFVFHPSGGN
TLVYEPLLKRLPAHTPMYGFERVDGDIEQRAKQYIPELRRIQGDGPFVLYGWSLGAVFAL
QVAQLLRAEGADVRVVGLIDLAIPTRDEDNSPEERVRRIERYQAFARKTYGIDAELDRAQ
LEELAAASDEEQFKMISDLIKISGAKIPGGVLEHQRTSWIESRHLARTTPSRYDGDVVLY
LADRYHDGMIELEPRFAERKPNGGWDEYLPHLQVVHIPGDHLQIVDEPRIAKIGADLTAK
LVAMEAKGDK
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaacgagggcacgcccgaccagacgaccgaggacgccaccaccgacgccgcc
gcgaccccggcgcccgacggtgccgtgggcgagggcgccgtgggcgacggtccgcgcacc
gacatgtcggtggccgaggtgcgggagtggttgcgccgctgggtcgccgacgcgaccggg
cagccgctggagaacatcaccgtcgaccggccgatggaggaattcggcctggcctcgcgt
gacgccctggcgctcggcggcgacatcgaggagctcaccggcgtggtgctgaccgcgacc
gtggtctaccagcacccgaccatcgcctcgctggccgaggtcatcgtgcacggcgaaccc
gaggttcccgagaccgcgggtgacgaggcgttctacaccgcgggctacacgccgggcgag
gcgcacgacatcgccatcgtcggcctgtccacccggctgccgggcgcgggcgacaccccg
gaatcgacctgggaattcctcatcaacggcggcgacgcgatccgcgaactgccggagggc
cgctgggcggagttcatgtccgacccgaacgtggcgaagatgatcgaggagagcaacacc
ctcggcggctacctcgaccaggaggtggtgaagggcttcgacgcggagttcttcgcgatg
tcgccgatcgaggtcgagcgggtcgatccgcagcagcgcctgatgatggagctcacctgg
gaggcgctcgaacacgcccgcatcccggccagcgagctgcgcggcgagtcggtcggcatg
ttcgtcggctcctccacccaggacttccagctcatcgccgcgctcgggctcggcgaccgc
gacccgaatctgccgatctcggccgaggcctacgcgctgctgggtgcctccaccggcatc
atcgccaaccgggtctcctacttcttcgacttccgcggtccgtcggtgaccgtcgacacc
gcgtgctcgtccacgctggtggccgtgcaccaggccgtgcgcgcgctgcgggacggcgag
gccgacctcgcgttggcgggcggcgtgaacatgatcctggccccggtggccaccctcggc
ttcgagaagaacggcgcggtggccaagaacggccgcatcaaggcgttctcatccgacgcc
gacggcatggtgcgctccgagggcgccggcctggtcgtgctcaagcggctcgccgacgcc
gaacgcgacggcgaccgcatcctcgccgtcatcaagggcaccgcggtcaacaacgacggc
cgctccaacggcctgttcgccccgaaccccgacgcgcaggccgacgtgctgcgccgcgcc
taccgcgacgcgggcatcaacccggcgacggtggactacatcgaggcgcacggcaccggc
acgctgatcggcgatcccatcgaggccgacgcgctcggccgggtggtcggccgcggccgc
gacgccgacaagcccgccctgctcggctcggccaagaccaacttcggtcacctcgagtcc
ggcgcgggcgtgcccagcctggccaaggtcgtgatggccttccagcacaacgtgattccg
ccgaacatcaacttcgcgggcccgaacccctacattccgttcgagcaggcccggctgaag
gtggtcgacgagcccacccagttcccgcgctacagcggcgtggccaccgtcggcatctcc
ggcttcggcttcggtggcgccaacgcccacgtcgtgctgcaggaatacaccccgccgacg
aaggccgcggtcgtcgcgcccggtaccgacaccgacaccgagaccgagaccaccgatgtg
atcgcggcggcgaccgcgatcaccgcggaagcgggcgacgtcgtcgccgaggccaccgag
atcaccgccgaggccgccgccgacgccgcggaatggtcggccgagcgcaccgagccgctg
ccggtgatcctgtgcgtgtcgggctacctgccctcgcgccgccgccgggccgccaccgaa
ctggccgactggctggagtccgaggcgggccgcgacgtgccgctggccgatgtggcgcgg
tcgctggccaagcgtagccactggcgctcgcgcggtgtggtgctggccaagacgcacgag
gaggcggtggccgggctgcgcgcgatcgccgcgggcaagccgggcaccggcgtgttcacc
gcggacgctcccgccgcccagggcccgatctgggtgctctccgggttcggcgcccagcac
cgcaagatgggcaagcagctgtacctggagaacgcgatcttccgccgcaccgtcgacgag
gtcgacgagctcgtccaggacgaggccggctattcggtgcgcgagatgatcctcgacgac
gcccaggactacaacgtcggcacctcgcaggtcggcatcttcaccatccagatcggcctg
gccgcgctgctgcgcgcgcacggcgcggaacccgaagcggtggtcggccattcgatgggc
gaggtcgcgggcgcctacatcgccggtggtctcaccctcgaggacgcggtccgggtgatc
tgcgcccggtcccgcctgatgggcgagggcgagcagatgatcagcgacgacgacgtgcgc
aacatggcgctggtcgagctgagcgccgccgaggtcgaggccatgctcaccgactacccc
gacgtcgaggtcgccgtctacgccgcgccgaccaacaccgtcatcggcggaccgtacgag
caggtgcaggcgatcgtcgccaaggtcgaggaggcgggcaagttcgcccgcgtgctgcag
acccgcggcgcaggccacacctcgcagatggacccgctgctcggcgagctggccgccgag
ctggccggcatcgagccgacccggctgcgcgcgggcctgtactcgacggtgcacaaggag
aagtactaccgtcccggccacgacccggtgcacgacgaggactactgggtcaccaacatg
cgccacagcgtgtacttcaccaacgcggtgaagctcgcggtggacagcggccacaccacc
ttcctcgagctcgcgcccaactcggtggcgctgatgcaggtgctcggcaccaccttcgcc
gccggcctgcacgacgcccagctcatccccacgctcaagcgcaaggaagacgagtcggcg
ggtgtgatctccgccctcgcccagctctacgtgcacggtcacgccgtcgacctgtcctcg
ctgctgcccgcgggcgactacgccgacatcccgcgcaccaccttcgtgcgcaaggagttc
tggcccgccgcgcggatggccaccggcagcggcaccggccgcgtgcccggcgcgcacgtc
gcgctgcccgacggcaggcacgtgtgggaggtccaggcgagcgcggtgaccgacccggcc
gagctggtccgcgccgccgccgcgcaggtgctcgccgacgtgaccgtcggcgcctcgctc
gcgcacggcgccgtcccggccgcgggcaccctgaccaccacgctcaccccgcatccgggc
ggtgcctcggtgcaggtgcacgccaaggaggacgcgcagttccggctgatcttcgacgcc
gtggtcacctccggcgcgccgctgcccaccccggcggtcgccgcgccgagcaccgccacc
gccgcggcgcccgccgccgagcccgaggtgctcgagcaggccggtgaccggtgggacccc
aacggcagccagaccatcgaggaacggctggcgctgatcgtcgccgagtcgatgggctac
gcggtcgaggacctgccgatggagatcccgctcatggagcttggtctggactcgctgatg
gcgatgcggatcaagaaccgcgtcgagtacgagttcgacattccgcagctgcagatccag
gccgtgcgcgatgccaacctcaccgaggtcggcaaggtgctgcgctacgcgatcgagcac
cgtgaccaggtcgccgccatcgccgagaagcaggccgcgggcgaggagatcaccgtcgac
gccgacttcgtcaccgccgcgcgtgccgcgatggaggcgggcgaggatccggtcgcggca
ctggaaaccgcggtgggcagccaggattcgggcacggcggccgacgctccggccgaaccc
gctgtggccgaccccgctgtggccgaccccgctccggtcgatcaggaggccgccgccttc
ggtgaggcgctggccgccgtcgacgaggacgacgtgcccccgcgcgacgcggccgaacgg
ctcacctacgcgacctgggcgatcgtcaccggcaagtcggcgggcggcatcttcaacacc
ctgccgatcctcgaagaggaggtcgccgagaagctggcggcgcgcctgtccgagcggatc
aaggccgaggtgaccgtcgacgacgtgctcgactgcgagaccatcgagcagctcgccgac
atcgtgcgcgaacgccaggacagcggcgccgagatcgacggcttcgtgcgcccgctgcgc
ccgcgccccgaaggctccgacgccgtgccggtgttcgtgttccatccctccggcggcaac
accctcgtctacgagccgttgctcaagcggctgcccgcgcacaccccgatgtacgggttc
gagcgggtggacggcgacatcgagcagcgggccaagcagtatatccccgagctgcgccgc
atccagggggacgggccgttcgtgctgtacggctggtcgctgggcgcggtgttcgcgttg
caggtcgcgcagttgctgcgcgccgagggcgccgacgtgcgggtggtcggactgatcgac
ctggccatcccgacccgggacgaggacaacagccccgaggagcgggtgcgccggatcgag
cgctaccaggccttcgcgcgcaagacctacggcatcgacgccgagctcgaccgcgcccag
ctcgaggagctggcggcggcctcggacgaagagcagttcaagatgatcagcgatctgatc
aagatcagcggtgccaagatccccggcggcgtgctcgaacatcagcgcacctcctggatc
gagagcaggcacctggcccgcaccacgccctcgcgctacgacggcgacgtggtgctgtac
ctggcggatcgctaccacgacggcatgatcgagctggagcccaggttcgccgagcgcaag
cccaacggcggctgggacgagtacctcccgcatctccaggtcgtccacattcccggcgat
catctgcagatcgtcgacgaaccgcggatcgcgaagatcggtgccgacctgaccgcgaag
cttgttgcgatggaggcgaaaggggacaagtga
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