Nocardia farcinica NCTC11134: ERS450000_04082
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Entry
ERS450000_04082 CDS
T04524
Symbol
sigB_5
Name
(GenBank) Sigma-37
KO
K03090
RNA polymerase sigma-B factor
Organism
nfr
Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfr03021
]
ERS450000_04082 (sigB_5)
Transcription machinery [BR:
nfr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ERS450000_04082 (sigB_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
HTH_31
E3_binding
GntR
Trp_repressor
DUF7343
HTH_Tnp_ISL3
HTH_26
Sigma70_ECF
HTH_ParB
CENP-B_N
Trypco1
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
CRY80864
UniProt:
A0A0H5P0L5
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All DBs
Position
p2:complement(600688..601488)
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AA seq
266 aa
AA seq
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MREEVTGGSTRAAAGGYQDLEPHFVELRALAEDDPRRRALREELIERCLPLAEHIARKFS
GRGENFEDLLQIARVGMVAAVDRFDPTQGAPFLGFAVPTIMGEVRRHFRDHTWSVRVPRR
LKELQATLNPAIETLTQRLGRMPKARELAEELGVDIAEVTQALVARNAYQTSSIDGSSGD
DGESSAPALADTLGAEDPEFGTVENYLAVKPLIAALPEREQRVLVMRFFHSMSQEQIAQQ
IGCSQMQVSRILSRTLKSLREQALRD
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaggaggtgacgggcggttccaccagagcggcggcgggcgggtaccaggatctc
gagccccacttcgtcgaactgcgcgcgctggccgaggacgacccgcgcagacgcgcgctg
cgcgaggaactgatcgaacgctgcctgcccctggccgagcacatcgcccgcaagttcagc
ggccgcggggagaacttcgaggatctgttgcagatcgcccgcgtcggcatggtcgcggcg
gtcgaccgtttcgacccgacccagggcgcgcccttcctcggcttcgcggtgcccaccatc
atgggcgaggtgcgcaggcacttccgcgaccacacctggtcggtgcgggtgccgcgccgg
ctcaaggaactgcaggccaccctcaacccggccatcgagacgttgacccagcggctgggt
cgcatgcccaaggcgcgcgaactggccgaggaactcggcgtcgacatcgccgaggtcacc
caggccctggtggcccgcaacgcctaccagacctcctccatcgacggttcgagcggcgac
gacggtgagtcgagcgcgcccgcgctggccgacaccctcggcgccgaggaccccgagttc
gggaccgtggagaactacctggcggtcaagccgctcatcgcggcgctgcccgagcgcgaa
caacgggtgctggtgatgcggttcttccactcgatgtcgcaggagcagatcgcccagcag
atcggctgctcgcagatgcaggtctcgcggatcctgtcgcgaacgctcaagagcctgcgg
gaacaggcgctgcgcgactga
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integrated database retrieval system
