Nocardia farcinica NCTC11134: ERS450000_04180
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Entry
ERS450000_04180 CDS
T04524
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nfr
Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfr03032
]
ERS450000_04180 (gyrB)
03400 DNA repair and recombination proteins [BR:
nfr03400
]
ERS450000_04180 (gyrB)
Enzymes [BR:
nfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ERS450000_04180 (gyrB)
DNA replication proteins [BR:
nfr03032
]
Prokaryotic type
DNA Topoisomerases
ERS450000_04180 (gyrB)
DNA repair and recombination proteins [BR:
nfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ERS450000_04180 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
CRY81046
UniProt:
A0A0H5PET2
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All DBs
Position
p2:complement(698770..700806)
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AA seq
678 aa
AA seq
DB search
MAAKHSNESGSKSTNYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDE
AMAGYATRVDVTLLADGGVEVVDDGRGIPVEMHAQGIPTVEVVMTQLHAGGKFDSESYAV
SGGLHGVGISVVNALSSRVEVEIDVDGYHWSQTYKEATPSKLVKGEPTDRTGTTVRFWAD
PEIFETTTYNFETVARRLQEMAFLNKGLTITLTDERVSESDVTDEIVSETAEAPKHGEPT
GEAASEHKVKTRTYHYPGGLEDFVRHINRTKQAIHNSVVSFTGKGTGHELEVAMQWNSGY
SESVHTFANTINTHEGGTHEEGFRAALTTVVNKYAKDKKLLKEKDGNLTGDDIREGLAAI
VSVKVAEPQFEGQTKTKLGNTEVKSFVQRTCNEHLTHWFEANPADAKTIVQKAVSSAQAR
VAARKARELVRRKSATDLGGLPGKLADCRSKDPSKSEIYIVEGDSAGGSAKSGRDSMYQA
ILPLRGKIINVEKARIDKVLKNNEVQSIITAFGTGIHDEFDISKLRYHKIVLMADADVDG
QHISTLLLTLLFRFMRPLVEHGHVYLAQPPLYKLKWQRSEPEFAYSDRERDGLLERGLAA
GKKINKDDGIQRYKGLGEMNPKELWETTMDPSVRVLRQVTLDDAAAADELFSVLMGEDVE
ARRSFITRNAKDVRFLDV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtggctgccaagcactccaacgaatcgggctccaagtcgacgaactacggtgcctcctcc
atcaccgttctcgaaggcctcgaggcggttcgcaagcgtcccggtatgtacatcggttcc
accggtgagcgcggtctgcaccacctgatctgggaggtcgtcgacaactccgtcgacgag
gcgatggccggctacgccacccgggtcgacgtcaccctcctggccgacggcggcgtcgag
gtcgtcgacgacggccgcggcatcccggtggagatgcacgcccagggcatcccgaccgtc
gaggtcgtcatgacccagctgcacgcgggcggcaagttcgactccgagtcgtacgcggtc
tccggtggcctgcacggtgtcggtatctccgtggtgaacgcgctgtcctcgcgggtcgag
gtggagatcgacgtcgacggctaccactggagccagacctacaaggaggccacgccgtcc
aagctggtcaagggggagccgaccgaccgcaccggcaccacggtccgattctgggccgac
ccggagatcttcgagaccaccacctacaacttcgagaccgtcgcccggcggttgcaggag
atggcgttcctgaacaagggcctcaccatcaccctgaccgatgagcgggtctccgagtcc
gacgtcaccgacgaaatcgtcagcgagaccgccgaggcgcccaagcacggtgaaccgacc
ggcgaagcagcctccgagcacaaggtcaagacgcggacctaccactatccgggcggtctg
gaggacttcgtccgccacatcaaccggaccaagcaggccatccacaattcggtggtctcg
ttcaccggcaagggcaccgggcacgagctcgaagtcgcgatgcagtggaactccggctac
tccgagtcggtgcacaccttcgccaacaccatcaacacccacgagggcggcacccacgag
gaaggcttccgcgcggcgctgaccacggtggtcaacaagtacgcgaaggacaagaagctc
ctcaaggagaaggacggcaacctcaccggtgacgacatccgcgagggcctggccgcgatc
gtgagcgtcaaggtcgccgagccgcagttcgagggccagaccaagaccaagctcggcaac
accgaggtgaagtcgttcgtgcagcgcacctgcaacgaacacctcacgcactggttcgag
gccaaccccgccgacgcgaagaccatcgtgcagaaggcggtgtcttcggcgcaggcgcgc
gtggccgcccgcaaggcgcgcgagctggtgcgccgcaagtcggccaccgacctgggcggg
ctgcccggcaagctggccgactgccgctccaaggatccgagcaagtccgagatctacatc
gtggagggcgactccgccggtggctcggccaagtccggccgcgactcgatgtaccaggcg
atcctgccgctgcgcggcaagatcatcaacgtcgagaaggcgcgcatcgacaaggtcctc
aagaacaacgaggtccagtcgatcatcaccgcgttcggcaccggcatccacgacgagttc
gacatcagcaagctgcgctatcacaagatcgtgttgatggccgacgccgacgtcgacggc
cagcacatttcgacgctgctgctgacgctgctgttccggttcatgcgcccgctggtcgag
cacggtcacgtgtacctggcccagccgccgctgtacaagctgaagtggcagcgcagcgag
ccggagttcgcctactccgaccgcgagcgcgacggcctgctcgagcgcggcctggccgcg
ggcaagaagatcaacaaggacgacggcatccagcgctacaagggtctgggtgagatgaac
ccgaaggaactctgggagaccaccatggatcccagtgtccgggtgcttcgtcaagtgacg
ttggacgacgcggccgcggccgacgagttgttcagcgtgctgatgggcgaggacgtggag
gcccgccgcagtttcatcacccgcaacgccaaggacgtccgcttcctcgacgtgtag
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