Nocardia farcinica NCTC11134: ERS450000_04259
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Entry
ERS450000_04259 CDS
T04524
Symbol
frdB
Name
(GenBank) Fumarate reductase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr00020
Citrate cycle (TCA cycle)
nfr00190
Oxidative phosphorylation
nfr00650
Butanoate metabolism
nfr00720
Other carbon fixation pathways
nfr01100
Metabolic pathways
nfr01110
Biosynthesis of secondary metabolites
nfr01120
Microbial metabolism in diverse environments
nfr01200
Carbon metabolism
Module
nfr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nfr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nfr_M00149
Succinate dehydrogenase, prokaryotes
nfr_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
ERS450000_04259 (frdB)
00650 Butanoate metabolism
ERS450000_04259 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
ERS450000_04259 (frdB)
00720 Other carbon fixation pathways
ERS450000_04259 (frdB)
Enzymes [BR:
nfr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
ERS450000_04259 (frdB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer2
Fer4_17
Fer4_9
Fer4_18
Fer4_7
Fer4_10
Fer2_4
Motif
Other DBs
NCBI-ProteinID:
CRY81143
UniProt:
A0A0H5P0U3
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All DBs
Position
p2:complement(786317..787063)
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AA seq
248 aa
AA seq
DB search
MGYDAKFRVWRGDETGGALQDFTVEVNEGEVVLDIIHRLQATQAPDLAVRWNCKAGKCGS
CSAEVNGRPRLLCMTRMSTFTRDELVTVTPMRTFPVVRDLVTDVSFNYEKAREIPSFTPP
PELKPGDYRMKQVDVERSQEFRKCIECFLCQNTCHVVRDHEENKQAFAGPRFLMRIAELE
MHPLDVADRRQLAQDDQGLGYCNITKCCTEVCPENIKITDNALIPLKERVADRKYDPLVW
LGNKLFRR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgggttacgacgccaaattccgcgtctggcgcggagacgagaccggtggcgcgctccag
gatttcaccgtggaggtgaacgagggcgaggtggtgctcgacatcatccaccgcctgcag
gccacccaggcccccgacctggcggtgcgctggaactgcaaggcgggcaagtgcggctcg
tgttcggcggaggtgaacggtcggccgcggctgctctgcatgacccggatgtcgaccttc
acccgcgacgagctcgtcaccgtgacgccgatgcgcacgttcccggtggtccgggatctc
gtcaccgatgtgtcgttcaattacgagaaggccagggagatcccgtcgttcaccccaccc
ccggagttgaagccgggggattaccggatgaagcaggtcgacgtcgagcgatcgcaggaa
ttccggaaatgcatcgagtgtttcctgtgccagaacacctgtcacgtcgtgcgtgatcac
gaggagaacaagcaggcgttcgcgggcccccgattcctgatgcggatcgcggaactggaa
atgcacccgctcgatgtcgccgatcgcaggcagctcgcgcaggacgaccagggcctgggc
tactgcaacatcaccaagtgctgcaccgaggtgtgcccggagaacatcaagatcaccgac
aacgcgctgatcccgctcaaggagcgggtggccgatcgcaagtacgatccgctggtctgg
ttgggcaacaagctgtttcggcgctga
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integrated database retrieval system
