Nocardia farcinica NCTC11134: ERS450000_04310
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Entry
ERS450000_04310 CDS
T04524
Symbol
pbpD_3
Name
(GenBank) Penicillin-binding protein 4 precursor
Organism
nfr
Nocardia farcinica NCTC11134
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Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
CRY81241
UniProt:
A0A0H5PFB8
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Position
p2:complement(847767..850130)
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AA seq
787 aa
AA seq
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MGAFGRRWGRRGAGGDPGSAPYASIAGWKDPATGTAEDSTDRDDAADPDNAAEDTAADRD
RGAAPRRRRTRGERLRRLALALFVIFVAVPGLLLALVYWSAEIPDPAAVQTNQIATITAS
DGTTVLAKVVPPEGNRTPVPLSEVPQHVRDAVLSAEDRNFYTNPGYSTSGFLRAARDNLL
GKEDAGGGSTITQQYVKNAFLGSERTISRKMRELVIAAKMARQWTKDEILAAYLNTIYYG
RGAYGIDAAAQAYFAKPPAQLTLAEGAVLASVIRTPSILDPETHLDDLKARWRYVLDGMV
EMGVLAPGDRDATAFPDIVPITELPDASAARGPEGLIRTQVLRELRDSGISERELNTGAL
QITTTIDVRAQQAAMTAVRDRLAGQPPELRAAVVSVDPRSGAVRAYYGGEDGTGYDFAQA
PLQTGSAFKVFAVIAAQQQSIPLTRAIDSSPITDHGTTITNVQNETCGRCSIAEALKRSL
NTSFYRLTMSMLDGPQAIADAAHQAGIPEHIPGVAGKTLTEDGGPPYNGIVLGQYLVRPI
DMASAYATIAASGWYHRPYFVQRVVTGDGRVLLDRGVPERPVGEQLPAPEQRIPAPIAEK
TIQAMMPIAAYSNGHALAGGRPSAAKTGTTQLGETDLNKDAWMVGFTPSLSTAVWIGTEH
SQPIRTAGGASIYGSGLPSDIWKQMMDDAHEGAPVEQFPVPDTAAEGPPSQVGRQGPPSG
NPYDILNPPQATRPQAPAVVIPPAPNTPAPEPEPQIVIPPAPAPAPAPPPPPRQIEIFPG
LTVPVPG
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgcgttcggcaggcggtgggggcgacgcggcgccgggggcgatccgggatcggcg
ccgtacgcgtccatcgcggggtggaaggaccccgcgaccggcaccgccgaggactccacc
gatcgggacgacgctgccgatccggacaacgctgccgaggacaccgcggccgaccgcgat
cggggagcggcaccgcggcggcgccggaccaggggcgagcggttgcggcggctggcactg
gcgctgttcgtgatcttcgtcgcggtgcccggcctgctgctggcgctggtgtattggagc
gccgagatccccgatccggccgcggtgcagaccaatcagatcgccaccatcaccgcctcc
gacggcacgaccgtactggcgaaggtggtgccgccggagggcaaccgcacgccggtgccg
ctgtcggaggttccccagcacgtgcgcgacgccgtgctctcggccgaggaccgcaacttc
tacaccaatcccggctactcgacctccgggttcctgcgtgccgcgcgcgacaacctgctc
ggcaaggaggacgcgggcggcggttcgaccatcacccagcagtatgtgaagaacgccttc
ctcggttccgaacgtacgatcagccgcaagatgcgcgagctggtgatcgcggcgaagatg
gcgcggcagtggaccaaggacgagatcctggccgcctacctcaacaccatctactacggg
cgcggcgcctacggcatcgacgccgccgcccaggcctacttcgccaagccgcccgcgcag
ctgaccctggccgagggcgcggtgctggcctcggtgatccggacaccgtcgatcctggac
cccgagacccacctcgacgacctgaaggcgcggtggcgctacgtcctcgacggcatggtg
gagatgggcgtgctcgcccccggcgaccgcgacgccaccgcgttccccgacatcgtgccc
atcaccgaactccccgacgccagcgcggcccggggccccgaggggttgatccgcacccag
gtgctgcgcgaactgcgcgactccgggatcagcgaacgcgaactgaacaccggcgcgctg
cagatcaccaccaccatcgacgtgcgcgcccagcaggccgcgatgaccgcggtgcgggac
cggctcgccggccagccgcccgaactgcgcgccgccgtcgtctcggtcgacccgcgctcg
ggggcggtgcgcgcctactacggcggcgaggacggcaccggctacgacttcgcgcaggcg
ccgttgcagaccggttcggcgttcaaggtgttcgccgtgatcgccgcccagcagcagagc
atcccgctgacccgtgcgatcgacagttccccgatcaccgaccacggcaccaccatcacc
aacgtgcagaacgagacgtgcgggcggtgctccatcgccgaggcgctcaagcgctccctc
aacaccagcttctaccggctcaccatgtcgatgctggacggcccgcaggccatcgccgac
gccgcgcaccaggcgggcatccccgagcacatcccgggcgtggcgggcaagaccctgacc
gaggacggcggcccgccctacaacggcatcgtgctcggtcagtacctggtgcgtccgatc
gacatggcctcggcctacgccaccatcgccgcctccggctggtaccaccggccgtatttc
gtgcagcgggtggtgaccggcgacggccgggtgctgctggaccgcggcgtgccggagcgg
ccggtgggcgagcaactaccggcgcccgaacagcgcattccggcgccgatcgcggagaag
accattcaggcgatgatgccgatcgcggcctactccaacgggcacgcgctggcgggcgga
cgcccgtcggcggccaagaccggcaccacgcagctcggcgagaccgacctgaacaaggac
gcgtggatggtcggcttcacgccgtcgctgtccaccgcggtgtggatcggcaccgagcac
tcccagccgatccgtaccgcgggcggtgccagcatctacgggtcggggctgccgtcggac
atctggaagcagatgatggacgacgcgcacgagggcgcgccggtcgagcagttcccggta
cccgacaccgccgccgagggaccgccctcgcaggtgggccggcagggaccgccgtcgggt
aatccgtacgacatcctcaacccgccgcaggccacccgtccgcaggcgcccgccgtggtg
atccccccggcgccgaacacccccgcgccggaacccgagccgcagatcgtgatcccgccc
gcgcccgcgccggctcccgcgccgccgcctccgcccaggcagatcgagatcttccccggc
ctgaccgtgccggtgccgggctga
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