Nocardia farcinica NCTC11134: ERS450000_04897
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Entry
ERS450000_04897 CDS
T04524
Name
(GenBank) anaerobic benzoate catabolism transcriptional regulator
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
nfr
Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfr03000
]
ERS450000_04897
Transcription factors [BR:
nfr03000
]
Prokaryotic type
Helix-turn-helix
XRE family
ERS450000_04897
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_3
HTH_31
HTH_19
HTH_26
HTH_25
HTH_24
HTH_37
Sigma70_r4
HTH_23
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
CRY82319
UniProt:
A0A0H5P4S7
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All DBs
Position
p2:complement(1528429..1529865)
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AA seq
478 aa
AA seq
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MQKMFAGARLRALRDQRGLSQTALAKLLGLSVSYVNQLENDQRPLTVQVLLKLNAAFDLD
MGFFATDTDARLLADLHEVFIEDPDAAGISNAELEDLTTRVPAAAHLLVNLHRRLRSATQ
QLEQISAGLEAPAASATAVTPYEDVRDFFYDHRNHIPELDSAAESMFQDNRLSIGGLDLQ
LTRLLHERHGITVTIRSDDPTDPGPKRVYDPAARHIALARRLSAGQRAFQLATQLAFLTH
NHTIDAITAMSNLPTASRDLLRIGLANYFAGALILPYNRFRNAAEDLRYDIELLSSMFEV
GFETVCHRLSTLQRTGQRGVPFFFVRIDRAGNISKRQSATAFHFSRVGGSCPLWVVHDAF
ATPGRIRTQIAQMPDGRKYLWLARTTDENTPGFLAAKRNFAIGLGCDLAYAEKLVYSQGL
PLHDDPTAVPIGAGCKVCERPNCAQRAFPQLGRAIRVDDNLAANIPYAPADSPTETRR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatgttcgcgggcgcgcggctgcgcgcactgcgcgaccagcgcgggctgtcg
cagaccgcgctggcaaaactgctcgggctatcggtgagctatgtcaatcagctcgagaac
gatcagcgtccgctgaccgtccaggtgctgctcaaactcaatgccgccttcgatctggac
atgggcttcttcgctaccgacaccgacgcacgactgctggccgatctccatgaggtgttc
atcgaggatcccgatgccgcgggcatcagcaatgccgaactcgaggatctcaccacgcgg
gtcccggccgccgcgcatctgctggtgaacttgcatcgcagactgcgcagcgcgacgcag
cagctcgagcagatctccgctggtctcgaggctccagccgcgagtgccacggcggtgact
ccgtacgaggacgtgcgcgacttcttctacgaccatcgcaaccacatacccgagctcgac
tccgccgcggaatcgatgtttcaggacaatcggctcagcatcggcgggttggacctgcag
ctgacccgcctgttgcacgagcgccacggcatcaccgtcacgattcgctccgacgatccg
accgatcccggccccaagcgtgtctacgatcccgcagcgcgccacatcgcgctcgcacga
cgactctcagccggtcagcgcgcattccagctcgcgacccagctggcgttcctgacgcac
aaccacaccatcgacgcgatcaccgccatgtcgaatctgcccaccgcatcacgcgacctg
ttgcgcatcggcctggccaactatttcgccggagcgctcatcctgccctacaacaggttc
cgtaatgccgccgaagatctgcgctacgacatcgagttgctgtcatcgatgttcgaggtc
ggtttcgagaccgtttgtcaccgcctgtcgacattgcagcggaccggacagcgcggtgtg
ccgttcttcttcgtgcgtatcgaccgggccggcaacatctccaaacgccagtccgccacc
gcgttccacttctcccgggtcggcggcagctgcccgctgtgggtcgtccacgacgccttc
gcaaccccggggcgaatccgcacccagatcgcccagatgcccgacggccgcaagtacctg
tggctggcccgcaccaccgacgagaacactcccggattcctcgccgccaagcgcaatttc
gcgatcggactcggctgcgacctcgcctacgccgagaaactggtgtactcccaaggactc
ccgctccacgatgaccccaccgcggtcccgatcggcgcgggctgcaaggtgtgcgaacgc
ccgaactgcgcacaacgagccttcccacagctcgggcgggccatccgcgtcgacgacaac
ctcgctgcgaacatcccttacgcccccgccgactcacccactgaaacccggcgctga
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integrated database retrieval system
