Nocardia farcinica NCTC11134: ERS450000_04913
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Entry
ERS450000_04913 CDS
T04524
Symbol
sucC
Name
(GenBank) Succinyl-CoA ligase [ADP-forming] subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr00020
Citrate cycle (TCA cycle)
nfr00640
Propanoate metabolism
nfr00660
C5-Branched dibasic acid metabolism
nfr00720
Other carbon fixation pathways
nfr01100
Metabolic pathways
nfr01110
Biosynthesis of secondary metabolites
nfr01120
Microbial metabolism in diverse environments
nfr01200
Carbon metabolism
Module
nfr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nfr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
ERS450000_04913 (sucC)
00640 Propanoate metabolism
ERS450000_04913 (sucC)
00660 C5-Branched dibasic acid metabolism
ERS450000_04913 (sucC)
09102 Energy metabolism
00720 Other carbon fixation pathways
ERS450000_04913 (sucC)
Enzymes [BR:
nfr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
ERS450000_04913 (sucC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
CPSase_L_D2
GARS_A
YAcAr
Motif
Other DBs
NCBI-ProteinID:
CRY82358
UniProt:
A0A0H5P4B4
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All DBs
Position
p2:1546874..1548040
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AA seq
388 aa
AA seq
DB search
MDLFEYQAKELFVKHGVPSSEGRVTDTAEDARAIAAEIGKPVMIKSQVKVGGRGKAGGVK
YAATPEDAFTHAQNILGLDIKGHITKKILVAEAKDIAEEYYISFLLDRANRTYLAMCSVE
GGMEIEEVAATKPERLAKVPVDAVKGVDLAFARSIAEQGHLPAEVLDAAAVTIEKLWEVF
VAEDATLVEVNPLVRTPQDEILALDGKVTLDENAGFRHPEHDEFADVDATDPLELKAKEN
DLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGENHGGVKPANFLDIGGGASAEVMAAGLD
VILNDAQVKSVFVNVFGGITACDAVANGIVKALEILGDEANKPLVVRLDGNKVDEGRKIL
VEAAHPLVTLAQTMDEGADKAAELAAAR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggatctcttcgaatatcaggcgaaggagctcttcgttaagcacggagtgccttcgtcc
gagggccgcgtcacggacacggccgaggacgcccgcgcgatcgcggcggaaatcggcaag
ccggtgatgatcaagtcccaggtcaaggtcggtggccgcggtaaggccggtggcgtgaag
tacgccgcgacgccggaggacgcgttcacccacgcgcagaacatcctcggcctggacatc
aagggacacatcaccaagaagatcctggtcgccgaggcgaaggacatcgccgaggagtac
tacatctccttcctgctcgaccgcgccaaccgcacctacctggccatgtgctcggtcgag
ggcggcatggagatcgaggaggtcgccgcgaccaagcccgagcgcctggccaaggtgccc
gtcgacgccgtcaagggcgtcgatctggccttcgcccgctcgatcgccgagcagggccac
ctgcccgccgaggtgctcgacgccgcggccgtgaccatcgagaagctgtgggaggtcttc
gtcgccgaggacgcgaccctggtggaggtcaacccgctggtgcgcaccccccaggacgag
atcctcgccctcgacggcaaggtcaccctggacgagaacgccggcttccggcaccccgag
cacgacgagttcgcggacgtcgacgccaccgacccgctcgagctcaaggccaaggagaac
gacctcaactacgtcaagctcgacggcgaggtcggcatcatcggcaacggcgccggcctg
gtcatgtcgaccctggacgtggtcgcctacgccggtgagaaccacggcggcgtgaagccg
gccaacttcctcgacatcggtggcggcgcctcggccgaggtgatggcggccgggctcgac
gtcatcctcaacgacgcgcaggtcaagagcgtgttcgtgaacgtgttcggtggcatcacc
gcgtgtgacgcggtcgccaacggcatcgtcaaggcgctcgagatcctgggcgacgaggcg
aacaagccgctggtcgtgcggctggacggcaacaaggtcgacgagggccgcaagatcctc
gtcgaggccgcgcacccgctggtgacgctggcgcagacaatggacgaaggcgccgacaag
gccgccgaactggcagccgcccgctaa
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