Nocardia farcinica NCTC11134: ERS450000_04992
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Entry
ERS450000_04992 CDS
T04524
Symbol
gmr_4
Name
(GenBank) Cyclic di-GMP phosphodiesterase Gmr
Organism
nfr
Nocardia farcinica NCTC11134
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Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
GAF_3
GGDEF_GdpP
Motif
Other DBs
NCBI-ProteinID:
CRY82513
UniProt:
A0A0H5P4S1
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Position
p2:1620929..1622797
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AA seq
622 aa
AA seq
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MPRRTLDSLVTQVASELMGVDATTMVASSERVLAKLVEHFDVDFSYLRHTNRENRTTVLV
AEWPHRADVPDPDPLRVVRFADADSVFRELEHATEPIIVRPGHDSADYQETIRKSSGIPK
VAMACVPLVSRGESTGVLGFIKEGDRSWSTRELNVLKAIAALFAQVQARVVAEERLRYIA
LHDDLTGLANRRALLEYMEDRLRPGSPGPVAAFFLDLDRLKALNDFLGHTAGDNFIRTLS
SRLRENLDPNDMIARLGGDEFVIVPAKPMDAVAAELEATRLQQLIGRRVTVGGESVSRGA
SVGVAVGIPGQTTVADVLRRADHALLSAKSGGGNGVAVFTDAMRAQFELQDDVELNLRGA
VSDGSLLLHYQPEVDLRTGRIVALEALVRWMHPTRGMLPPAAFVTVAEATNLAGELGRWV
IRTACAQFAEWRRRGLAANTVMRINVSPVQLVSLDFVERIEDILRLFGIDGSSVCLEITE
HVVVQDLARTQVTLRGLKRMGVQIAIDDFGTGYSSLSHLKALPVDAVKIDRGFVQRLGAS
TDDLAIVKSIIGLAGSFGLGVVGEGVETAVAARTLVGLGCYRAQGFLIARPMPADEVEAH
LVTGRIPLDLDLPRAVRGVAKR
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcggcgaacgctcgactcactggtgacgcaagtcgcctccgagttgatgggcgtc
gacgccaccaccatggtggcgtcgagcgaacgggtgctggccaagctggtcgagcatttc
gacgtcgacttcagctacctgcgccacaccaaccgggagaaccgcaccaccgtgctggtc
gccgaatggccgcaccgcgccgacgtccccgaccccgatccgctgcgcgtggtccgcttc
gccgacgccgactcggtcttccgggaactcgagcacgccaccgagccgatcatcgtccgg
cccggccacgattcggccgactaccaggagaccatccgtaaatcctcgggaattccgaag
gtggcgatggcctgcgtgccgctggtctcgcgcggggagtccaccggcgtgctcggcttc
atcaaggagggcgaccgcagctggagcacccgcgaactcaacgtgctcaaggccatcgcc
gcgctgttcgcccaggtgcaggccagggtggtggccgaggaacggttgcgctacatcgcg
ctgcacgacgacctcaccggcctggccaaccgccgggccctgctcgaatacatggaggac
cggctgcggcccggcagccccggcccggtggccgcgttcttcctcgacctggaccggctc
aaggccctcaacgacttcctcggtcacaccgcgggcgacaacttcatccgcacgctgtcc
tcccggctgcgcgagaacctggaccccaacgacatgatcgcccggctcggcggcgacgaa
ttcgtcatcgtgcccgccaagccgatggacgccgtcgcggccgaactcgaggccacccgg
ttgcagcagttgatcgggcggcgcgtgaccgtcggcggggaatcggtcagccgcggcgcg
agtgtcggtgtcgccgtgggcattccggggcagacgacggtggccgacgtgctgcgccgc
gccgaccacgcgctgctgtcggccaaatccggcggcggcaacggcgtcgcggtgttcacc
gacgcgatgcgggcccagttcgaactccaggacgacgtggagctgaacctgcgcggcgcg
gtgtccgacggctccctgctgctgcactaccagcccgaggtggatctgcgcaccggccgg
atcgtggcgctcgaggcgctggtgcgctggatgcaccccacccggggcatgctgccgccc
gccgcgttcgtcaccgtcgccgaggccaccaacctggccggggaactgggccgctgggtg
atccgcaccgcctgcgcccagttcgcggaatggcgcaggcgtgggctggccgccaacacc
gtgatgcggatcaacgtctcaccggtgcagctggtgagcctggatttcgtcgagcggatc
gaggacatcctgcggttgttcggcatcgacggcagctcggtctgcctggagatcaccgaa
cacgtcgtcgtgcaggatctcgcgcgcacccaggtcaccctgcgcggactcaagcggatg
ggggttcagatcgccatcgacgacttcggcaccggctacagctcgctctcccacctcaag
gcgctgccggtcgacgcggtgaagatcgaccgcggattcgtgcagcgactcggcgccagc
accgacgacctggccatcgtgaagtccatcatcggcctggccggctcgttcggtctcggt
gtggtcggcgagggcgtggagaccgcggtcgcggcccgcaccctggtcggcctgggttgc
tatcgggcccaagggttcctcatcgcccgccccatgcccgccgacgaagtggaggcgcat
ctggtgaccgggcgcatcccgctcgacctcgacctgccgcgcgcggtccgcggcgtcgcc
aagcgctga
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