Nocardia farcinica NCTC11134: ERS450000_05021
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Entry
ERS450000_05021 CDS
T04524
Symbol
csd_3
Name
(GenBank) Probable cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr00450
Selenocompound metabolism
nfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
ERS450000_05021 (csd_3)
Enzymes [BR:
nfr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
ERS450000_05021 (csd_3)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
ERS450000_05021 (csd_3)
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Motif
Pfam:
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
CRY82542
UniProt:
A0A0H5P4H2
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All DBs
Position
p2:complement(1652633..1653811)
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AA seq
392 aa
AA seq
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MLDDTRVRADTPGLAADPDLVFLDSAGSSLPPRVVLDTQVAHLRRETEIGGYRAAAERLD
DLAGVKTAIGELINADPDCVALSDSASRAWADFFYSVPLRPGDRVLISGADYASNAIAAL
QRARATGAVVEQIPSDDTGQLDLDALERMVDERVALVSLLHVPTNGGLVNPAAEATKIAH
SAGAMVLLDACQSAGQLPLDVAELGVDALSATGRKWLRGPRGTGFLYVRPELATTMEPQR
LDLHSAAWTGPQDYELAPDARRFEFWECDVAARLGLGAAVRYLLDLGPADVYAAIAERAG
HLREAFAALPRVTVRDNGVRRGGIVSFTVDGVPATEVRDRLAAQNITVTVSFAGSTLLDM
SARGLDAVVRASPHCFVGFDELDRFVRAVAEL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgctggacgacacacgcgtgcgggccgacacccccgggctggccgccgaccccgacctg
gtcttcctcgacagcgccggctcctcgctcccgccgcgggtggtgctggacacccaggtc
gcgcacctgcgccgggaaaccgagatcggcggctaccgcgccgccgccgaacgcctcgac
gacctggccggggtgaagaccgcgatcggcgagctgatcaacgccgacccggattgcgtg
gcgctcagcgacagcgccagccgcgcctgggcggacttcttctactcggtgccgttgcgt
cccggcgaccgcgtgctgatcagcggcgccgactacgccagcaacgcgatcgccgcgctg
cagcgagcccgcgccaccggcgccgtcgtggagcagatccccagcgacgacaccggccag
ctggacctggacgcgctggagcggatggtcgacgagcgggtcgcgctggtctcactgctg
catgtgccgaccaacggtgggctggtgaaccccgccgccgaggcgacgaagatcgcgcac
tcggcgggcgcgatggtgctgctggacgcctgccagtcggccgggcagctgcccctcgac
gtcgccgagctcggtgtcgacgcgctctcggcgaccggccgcaagtggttgcgcggcccg
cggggcaccggattcctctatgtccgaccggaattggcgacgacgatggaaccgcagcgg
ctggacctgcacagcgccgcctggaccggcccgcaggactacgaactcgcacccgacgcc
cgccgcttcgaattctgggagtgcgatgtcgccgcccggctcggcctgggtgcggcggtg
cgctacctgctcgacctcggcccggccgacgtgtacgccgcgatcgccgagcgggccggg
cacctgcgcgaggcgttcgccgcgctgccgcgggtcacggtgcgcgacaacggcgtccgt
cgcggcggcatcgtctccttcaccgtcgacggcgtgcccgccaccgaggtgcgcgaccgg
ctggccgcgcagaacatcaccgtcaccgtgagcttcgccgggtccacgttgctggacatg
agcgcccgcgggctcgacgccgtggtgcgcgcctcaccgcactgcttcgtcggcttcgac
gagctggaccggttcgtccgcgcggtcgcggagctgtag
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