Nocardia farcinica NCTC11134: ERS450000_05118
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Entry
ERS450000_05118 CDS
T04524
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ERS450000_05118 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfr03400
]
ERS450000_05118 (xseA)
Enzymes [BR:
nfr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ERS450000_05118 (xseA)
DNA repair and recombination proteins [BR:
nfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ERS450000_05118 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF4232
Motif
Other DBs
NCBI-ProteinID:
CRY82725
UniProt:
A0A0H5P4G3
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All DBs
Position
p2:complement(1746119..1747396)
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AA seq
425 aa
AA seq
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MTQDGSAPANSAEHPWPVRSVSVKVMQWIDRLGSIWVEGQITQINLRPGARTAFLVLRDP
SADMSLQVTCDPELIRRSPVPLQEGSRVVVYGKLVFFPARGSISLRVLEIRPVGVGELLA
RIERLKALLAAEGLFDERLKRPIPFLPKVVGLITGRGGAAEHDVLTVARNRWPAVRFEVR
NTAVQGPTAVPQILSALAELDRHPEVEVIVLARGGGSVEDLLPFSDEALCRAIVAATTPI
VSAIGHEPDNPLSDYVADLRAATPTDAAKRVVPDAAAELALVRELRARSAAALRGWVDRE
ARALAQLRSRPVLADPLREIDRRATEIERLRADARRCVRHLIRTESTATAHLREKLTAVG
PAATLARGYAVVQRVTGPERHVVRSIADSPAGSQLRIRVADGAVAAAALGTTAAGTRTAD
DTGGN
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggacggttcggcgcccgccaactccgccgagcacccgtggccggtgcgctcg
gtgtcggtcaaggtgatgcagtggatcgatcgcctgggcagcatctgggtggagggccag
atcacccagatcaacctgcgccccggcgcccgcaccgcgttcctggtgctgcgcgatccg
tctgccgacatgtcgttgcaggtcacctgtgatcccgaactcatccgccgcagcccggtg
ccgttgcaggagggcagccgtgtcgtcgtctacggcaagctggtgttcttcccggcccgc
ggcagcatctcgctgcgggtgctggagatccggccggtgggcgtcggggagctgctggcc
cggatcgagcggctgaaggcgctgctggccgccgagggcttgttcgacgagcggctcaaa
cggccgatcccgttcctgccgaaggtggtcgggctgatcaccggccgcggcggcgcagcc
gagcacgatgtgctcaccgtcgcgaggaaccggtggcccgcggtgcgtttcgaggtgcgc
aacaccgcggtgcaggggccgaccgcggtgccgcagatcctgtccgcgctggccgaactc
gaccggcatcccgaggtcgaggtgatcgtgctcgcccgcggcggcggcagcgtggaggac
ctgctgcccttctccgacgaggcgctgtgccgggccatcgtcgccgcgaccaccccgatc
gtcagcgcgatcggccacgaaccggacaacccgctgtcggactacgtcgccgacctgcgc
gcggccacccccaccgacgcggcgaagcgcgtggtgcccgacgccgccgccgaactcgcc
ctcgtgcgcgagctgcgcgcccgttcggcggcggccctgcgcggctgggtggaccgggag
gcaagggcgctggcgcaactgcgctcgcgcccggtgctggccgacccgctgcgcgagatc
gaccggcgcgccaccgagatcgaacggctgcgcgccgacgccaggcgctgcgtgcggcat
ctgatccgcaccgaatccaccgcgaccgcgcacctgcgggaaaagctcacggcggtgggt
ccggccgccaccctggcccgcggttacgctgtggtgcaacgggtcaccggcccggagcgg
cacgtggtgcgcagcatcgccgactcgcccgcgggcagccagctgcgcatccgcgtcgcc
gacggcgcggtcgccgcggccgcgctcggcaccaccgccgcgggcacccgcaccgccgac
gacacaggagggaactga
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