Nocardia farcinica NCTC11134: ERS450000_05187
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Entry
ERS450000_05187 CDS
T04524
Symbol
dapE_3
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr00300
Lysine biosynthesis
nfr01100
Metabolic pathways
nfr01120
Microbial metabolism in diverse environments
nfr01230
Biosynthesis of amino acids
Module
nfr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ERS450000_05187 (dapE_3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nfr01002
]
ERS450000_05187 (dapE_3)
Enzymes [BR:
nfr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
ERS450000_05187 (dapE_3)
Peptidases and inhibitors [BR:
nfr01002
]
Metallo peptidases
Family M20
ERS450000_05187 (dapE_3)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
CRY82862
UniProt:
A0A0H5P5C7
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All DBs
Position
p2:1811969..1813069
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AA seq
366 aa
AA seq
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MTIDLSADPIALTAALVDIPSVSLDERAIADVVERALREQTTGFEVLRHGNVVLARTQRG
LPTRVILAGHLDTVPIADNVPSRFGTGPDGEQLLHGCGTVDMKSGDAVFLHLAATVTDPV
HDLTLIFYDGEEIAAEYNGLGHIERDLPEWLDGDLAVLGEPSGGWIEAGCQGTLRVRLRT
AGVRAHSARAWMGDNAIHRLAPVLARLADYRARQVDIDGCVYREGLSAVAVRGGVAGNVI
PDVAEVDVNFRFAPDRDLDQAIAHVREVFAGLEVEFEVTDAAPGALPGLTAPAAKALIES
VNAHGGGGVRAKYGWTDVSRFAARGIPAVNFGPGDPNLAHKRDEHVPTAQITAVTAMLRA
YLTGAV
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatcgacctgtccgccgatcccatcgccctcaccgccgccctcgtcgacatcccc
agcgtctcactggacgagcgcgccatcgcggatgtcgtggaacgggcactgcgggagcag
accaccgggttcgaggtgctgcggcacggcaacgtcgtgctcgcccgcacccagcgcggc
ctgccgacccgggtgatcctggccgggcacctggacaccgtgccgatcgccgacaacgtg
ccgagccgcttcggcaccggccccgacggcgagcagctgctgcacggctgcggcaccgtc
gacatgaagtccggcgacgcggtgttcctgcacctggccgcgacggtgaccgaccccgtg
cacgacctcaccttgatcttctacgacggcgaggagatcgccgccgagtacaacggcctc
ggccacatcgaacgcgacctgcccgaatggctcgacggcgacctggccgtgctcggcgaa
ccctccggcggctggatcgaggcgggctgccagggcacgctgcgggtgcggctgcgcacc
gcgggcgtgcgggcgcattcggcacgggcctggatgggggacaacgcgatccaccggctg
gcgccggtgctggcgcggctggccgactaccgggccaggcaggtcgacatcgacggctgc
gtgtaccgcgaaggactgtccgcggtggcggtgcgcggcggggtggccggcaacgtgatc
cccgatgtcgccgaggtggacgtcaacttccgcttcgcccccgaccgtgacctggaccag
gcgatcgcccacgtgcgcgaggtgttcgccgggctggaggtggagttcgaggtgaccgac
gccgcaccgggcgcgctgcccggcctcaccgcgcccgcggcgaaggcgctcatcgagtcg
gtgaacgcgcacggcggcggcggggtgcgggccaagtacggctggaccgacgtgtcgcgt
ttcgccgcccgcggcatccccgcggtgaacttcggtcccggcgacccgaacctggcgcac
aagcgcgacgagcatgtgccgaccgcgcagatcaccgcggtcaccgcgatgctgcgcgcc
tacctcaccggcgcggtctga
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