Nocardia farcinica NCTC11134: ERS450000_05226
Help
Entry
ERS450000_05226 CDS
T04524
Name
(GenBank) Long-chain-fatty-acid--CoA ligase FadD15
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr00061
Fatty acid biosynthesis
nfr00071
Fatty acid degradation
nfr01100
Metabolic pathways
nfr01212
Fatty acid metabolism
nfr02024
Quorum sensing
nfr04146
Peroxisome
Module
nfr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ERS450000_05226
00071 Fatty acid degradation
ERS450000_05226
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ERS450000_05226
09145 Cellular community - prokaryotes
02024 Quorum sensing
ERS450000_05226
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nfr01004
]
ERS450000_05226
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfr04147
]
ERS450000_05226
Enzymes [BR:
nfr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ERS450000_05226
Lipid biosynthesis proteins [BR:
nfr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ERS450000_05226
Exosome [BR:
nfr04147
]
Exosomal proteins
Exosomal proteins of breast milk
ERS450000_05226
Exosomal proteins of breast cancer cells
ERS450000_05226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
CRY82930
UniProt:
A0A0H5P522
LinkDB
All DBs
Position
p2:complement(1849707..1851500)
Genome browser
AA seq
597 aa
AA seq
DB search
MREFEVPASYTIPDDANNSDNVFRHAEQSPNAVLFNVPNGSGGWKDVTASQFAKTVTGVA
KGLIAAGIELGDRVAIMAPTRYEWQVLDFAVWAAGGCTVAIYDSSSAEQAKWILQDSATK
LLVVDSDKHRAVIDEIETGALPDLAEIVQIDKGAVDDLIERGKDLDDQVVHERRKQVGAS
SPATLIYTSGTTGRPKGVMLSHANLWAESTADRIALGKYVTEGKKTLMFLPLAHVFARAV
ALAAFDAKVIVAHTSDWTTLVDQFGAFKPHFILSVPRVFEKVFNGAKQKAHDGGKGKIFD
AAAATAIEYSEALDNGGPGLVLKLKHALFDKLVYSKLKTALGGQCEAAVSGGGPLGARLG
HFFRGVGVTIYEGYGLTETTAAFSVNTPEHIRVGSVGRPIEGHAAKIAEDGELLLRGPVV
FNGYWGNEAATEEAFADGWFKTGDLGAIDADGFITITGRKKEIIVTAGGKNVSPALLEDS
LRAHPLISQVMVVGDGQPFIGALITLDPEALPGWKERHGLAADTAIETVVEHPELVAEID
AAVAETNKKVSHAEQIKKHRILTVDWTQEGGELTPKMSLKRAVVMKQYAAEVEKIYA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagttcgaagtcccggcttcctacacaatcccggatgacgcgaacaattccgac
aacgtcttccgccatgccgaacagtcgccgaacgccgtgctgttcaacgtgccgaacggc
agtggtggctggaaggacgtcacggcgtcgcagttcgcgaagaccgtcaccggtgtggcg
aagggcctgatcgccgcgggcatcgaactcggcgaccgcgtggccatcatggcgccgacc
cgctacgagtggcaggtgctcgacttcgccgtctgggccgccggtggctgcaccgtcgcc
atctacgacagctcctccgccgagcaggccaagtggatcctgcaggactccgccaccaag
ctgctggtggtcgacagcgacaagcaccgcgccgtgatcgacgagatcgagaccggcgcg
ctgcccgacctcgccgagatcgtgcagatcgacaagggcgccgtcgacgacctgatcgag
cgcggcaaggacctcgacgaccaggtcgtacacgagcggcgcaagcaggtcggcgcgagc
tcgcccgccaccctgatctacacctcgggcaccaccgggcggcccaagggcgtcatgctc
tcgcacgccaacctgtgggcggagtccaccgccgatcgcatcgccctgggcaagtacgtc
accgagggcaagaagaccctcatgttcctgccgctggcgcacgtgttcgcccgcgcggtg
gcgctggcggccttcgacgccaaggtgatcgtcgcccacacctccgactggaccacgctg
gtggaccagttcggcgcgttcaagccgcacttcatcctctcggtgccgcgcgtgttcgag
aaggtgttcaacggcgccaagcagaaggcgcacgacggcggcaagggcaagatcttcgac
gccgccgccgcgaccgcgatcgagtacagcgaggcgctcgacaacggcggccccggcctg
gtgctcaagctcaagcacgccctgttcgacaagctggtctacagcaagctcaagaccgcg
ctgggcgggcagtgcgaggcggccgtctccggcggcggcccgctgggcgcgcggctcggc
cacttcttccgcggcgtcggcgtgacgatctacgaaggctacggcctgaccgagaccacg
gccgcgttcagcgtgaacacccccgagcacatccgggtcggctcggtcggccgcccgatc
gagggccacgccgccaagatcgccgaggacggcgagctgctgctgcgcggcccggtggtg
ttcaacggctactggggcaacgaggccgccaccgaggaggccttcgccgacggctggttc
aagaccggtgacctgggcgcgatcgacgccgacgggttcatcacgatcaccggccgcaag
aaggagatcatcgtcaccgcgggcggcaagaacgtctcccccgcgctgctcgaggactcg
ctgcgcgcgcatccgctgatcagccaggtgatggtggtcggcgacggccagccgttcatc
ggcgcgctgatcaccctcgacccggaggcgctgccggggtggaaggaacggcacggcctg
gccgcggacaccgcgatcgagacggtcgtcgagcatcccgaactggtcgccgagatcgac
gccgcggtggccgagaccaacaagaaggtctcgcacgccgaacagatcaagaagcaccgc
atcctgaccgtggactggacccaggaaggcggcgagctgacccccaagatgtcgctcaag
cgcgcggtggtcatgaagcagtacgcggccgaggtggagaagatctacgcctga
DBGET
integrated database retrieval system
