Nocardia farcinica NCTC11134: ERS450000_05340
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Entry
ERS450000_05340 CDS
T04524
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr03030
DNA replication
nfr03430
Mismatch repair
nfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ERS450000_05340 (dnaQ)
03430 Mismatch repair
ERS450000_05340 (dnaQ)
03440 Homologous recombination
ERS450000_05340 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfr03032
]
ERS450000_05340 (dnaQ)
03400 DNA repair and recombination proteins [BR:
nfr03400
]
ERS450000_05340 (dnaQ)
Enzymes [BR:
nfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ERS450000_05340 (dnaQ)
DNA replication proteins [BR:
nfr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ERS450000_05340 (dnaQ)
DNA repair and recombination proteins [BR:
nfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ERS450000_05340 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
TerD
BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CRY83156
UniProt:
A0A0H5PL32
LinkDB
All DBs
Position
p2:complement(1988547..1990283)
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AA seq
578 aa
AA seq
DB search
MLPDHRLGACALVDLETSGLAPTVHRALSVTVITVEDTGVVSGEFHTLLDPGCDPGPVHI
HGLTPERLSGAPKFEDVQQTLESLLRDRLLIAHNAGFDYGFLDQEFRRCGGKLPVSRRMC
TLALARRVAPPTPDRRLASLAAHYGVVQRRSHDSLDDTRVLFGVLHGLLGDARRMGIDPP
VLPCSPARATTVRYDRARVGPKPPCPYVNPGRFEPGKPLVQGMQVAITGSTRRTRAELVA
CGDEAGLNMVGSVSRRTSLLVTNQPLGSSAKARRATEHGTPTIDEEEFVRLLSAVQPGDT
AAPVTRARSAPRRTPPTAPGPLAGRRILVVGGAHEEAALARTRIGELGGSAAVNLSATVT
DILALANATSDRRFPRILELGLPIHGPELFTANGTASVGRLDDPQNLVRGQVIDLPIETS
GHEWTFQFSWSQSVTREVDLVAFVLGESDRVSADEDFVFYNQPQNECVLLTTDGPNEQLI
TLRLDAVPGHCRRIVLAAALDEAEATFADLGPIEVEAAPGPDAAPIARTTLDAATTERTL
LLLEVYLRGEAWRLRSVGQGYDTGLAALATRFGVDVEN
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgctccccgaccatcggctgggcgcgtgcgccctggtcgacctggagacgagcggcctc
gctcccacagtccaccgggcgttgtcggtcaccgtgatcaccgtcgaggacaccggcgtg
gtctcgggtgaattccacaccctgctcgaccccggttgcgacccgggtccggtccacatt
cacggactcacgcccgaacggctctccggcgccccgaagttcgaggacgtgcagcagacc
ctggagtcactactgcgcgaccgcttgctgatcgcacacaacgccggtttcgactacggc
ttcctcgaccaggagttccgccggtgcggcggcaaactgccggtgtcgcgccggatgtgc
accctcgcgctcgcccgccgggtcgcgcccccaactccggatcggcgcctcgccagcctc
gcagcacactacggggtggtccagcgccgctcccacgattccctcgatgacacgcgggtg
ctcttcggcgtgctgcacggtcttctcggagacgcccggcgaatggggatcgacccgccg
gtcctcccctgctcacccgcgcgcgcgaccaccgtccgctacgaccgcgcccgcgtcggc
cccaagccgccttgcccctacgtgaatccggggcgcttcgagcccgggaagcctctcgtc
cagggcatgcaggtggcgatcaccggctctacccgccgcacccgtgcagaactcgtcgcg
tgcggtgatgaagccggactcaacatggtcggctcggtcagccgccgcaccagtctgctg
gttaccaaccagcctctcggctcgtccgccaaggcccgccgcgcaacagagcacggcacg
ccgaccatcgatgaagaggagttcgttcgactgctgagcgccgtgcaacccggcgacacc
gctgcgcccgtcacccgagctcgatcggccccacgcaggacgccgccgactgcgccggga
ccactggcgggccgccgcattctggtcgtcggcggcgcgcacgaggaagcggcgctggcg
cgcacaaggatcggcgaactgggcgggtcggccgcggtcaacctgtccgctaccgtcacc
gatatcctcgcgctggccaacgcgacatcggaccggcggttcccgagaatcctcgaactc
ggactccccattcacggacccgagctgttcaccgcgaacgggaccgcgtcggtcggacgc
ctcgacgatccccagaacttggtacgcggtcaggtcatcgatcttccgatcgaaacctca
ggtcacgagtggacgttccagttctcgtggtcccagagcgtcacccgggaggtcgacctc
gtcgccttcgttctcggcgaatcggaccgcgtttctgccgacgaggatttcgtcttctac
aaccaaccgcagaacgagtgcgtcctcctcaccaccgacggcccgaacgagcagctgatc
acgcttcgtctcgacgccgtccccggtcactgccgccgcatcgtcctcgcggctgccctg
gacgaggccgaggccactttcgccgacctgggtcccatagaagtcgaagcagccccgggc
cccgatgctgccccgatcgcccgaacaacgctcgatgcggcgacgaccgaacgcacactt
ctcttgctcgaggtctacctgcgcggcgaagcgtggcgcctgcggtcggtcggccagggc
tacgacaccggtctcgccgcactggctacccgcttcggcgtcgacgtggagaactga
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