Nocardia farcinica NCTC11134: ERS450000_05518
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Entry
ERS450000_05518 CDS
T04524
Name
(GenBank) Farnesyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr00900
Terpenoid backbone biosynthesis
nfr01100
Metabolic pathways
nfr01110
Biosynthesis of secondary metabolites
Module
nfr_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
ERS450000_05518
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
ERS450000_05518
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nfr01006
]
ERS450000_05518
Enzymes [BR:
nfr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
ERS450000_05518
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
ERS450000_05518
2.5.1.29 geranylgeranyl diphosphate synthase
ERS450000_05518
Prenyltransferases [BR:
nfr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
ERS450000_05518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF3100
Motif
Other DBs
NCBI-ProteinID:
CRY83485
UniProt:
A0A0H5P6Q4
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All DBs
Position
p2:2181328..2182437
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AA seq
369 aa
AA seq
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MAGETMIDRPVHTEAPPVPEHPAAWCTRMRDDTARVLDDFVRARRREHLGAPETAVLGQV
IGDFVAGGKYLRSALHLAGWSTVAPVGAAAIRAAASAELLHCFALMQDDVMDESARRRGR
PAAHVRFAQWHARQGLSGSSDRFGESAATLAADLCLVWAEQLLRESGVDAAALARALPRY
DAMRSELAVGQFRDLVNDARRRPALADVLAVARAKSGHYTVRRPLELGAELAGAPPAVLA
ALGRYGVAIGEAFQVRDDLLGVFGDPGATGKPVGADLRNGKATTVVVLAREYADGVTRRE
LARLAELPELGAEEIARYVRVIAETGAPRRLELLIAHRLREGLAAIAGLEPGARAVLTHL
AHACTDRSR
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgagacgatgatcgaccggccggtgcataccgaggcgcctccggtgcccgag
catccggccgcgtggtgcacccggatgcgcgacgacaccgcgcgcgtgctcgacgatttc
gtgcgcgcgcgccgccgcgagcacctgggcgcgccagaaaccgccgtgctgggacaggtg
atcggcgacttcgtcgcgggcggcaagtacctgcgttcggcgctgcacctggcgggctgg
tcgaccgtggcgccggtcggcgcggccgcgatccgcgcggcggcgagcgcggaactgctg
cactgcttcgcgctcatgcaggacgacgtgatggacgagtccgcgcggcggcgcggccgg
cccgcagcgcacgtccggttcgcgcagtggcatgcgcggcaaggactttcgggatcgtcg
gaccgcttcggcgagtccgcggcgacgctggcggccgacctgtgcctggtgtgggccgag
cagctgctgcgcgagagcggggtggacgccgccgcactggccagggcgttgccccgctac
gacgccatgcgcagcgaactggcggtcgggcagttccgcgacctggtgaacgacgcgcgg
cggcggccggcactggccgacgtgctggcggtggcgcgggcgaagtcggggcactacacc
gtgcgccgaccgctggagctgggggcggagctggccggggcaccgccggcggtgctcgcg
gcgctcggccggtacggggtcgccatcggggaggcgttccaggtgcgcgacgacctgctc
ggcgtcttcggcgatccgggcgcgaccggcaagccggtcggggcggacctgcgcaacggc
aaggccaccaccgtggtggtgctggcccgcgaatacgccgacggcgtgacgcggcgggag
ctggcacggctggccgaactgccggaactcggtgccgaggagatcgcccggtacgtgcgg
gtgatcgcggagaccggcgcgccacggcggctcgaactgctgatcgcgcaccggctgcgc
gaagggctcgccgcgatcgccgggctagagccgggcgcccgcgcggtgctcacccatctc
gcccacgcgtgcaccgaccggtcgcgctga
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