Nocardia farcinica NCTC11134: ERS450000_05705
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Entry
ERS450000_05705 CDS
T04524
Symbol
hup
Name
(GenBank) Histone-like protein
KO
K03530
DNA-binding protein HU-beta
Organism
nfr
Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfr03032
]
ERS450000_05705 (hup)
03036 Chromosome and associated proteins [BR:
nfr03036
]
ERS450000_05705 (hup)
03400 DNA repair and recombination proteins [BR:
nfr03400
]
ERS450000_05705 (hup)
DNA replication proteins [BR:
nfr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ERS450000_05705 (hup)
Chromosome and associated proteins [BR:
nfr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ERS450000_05705 (hup)
DNA repair and recombination proteins [BR:
nfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ERS450000_05705 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
CRY83826
UniProt:
A0A0H5PMV3
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All DBs
Position
p2:2375959..2376657
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AA seq
232 aa
AA seq
DB search
MNKAELIDVLTEKLGTDRRTATAAVEHVVDTIVRAVHKGQSVTITGFGVFEQRKRAPRVA
RNPRTGETVKVKATSVPAFRPGAQFKAVIAGKQKLAATGPAVKRGVNAPVAAKKTAAKKT
TAAAKKTAAKKTTTATKAPAKKTTATKAPAKSTARKTTTATKTAAKKAPAKKTTATKASA
TKASATKATAAKKTTTAAKKTTATKATAAKKTTAAKKAPAKKTAAKKTAARR
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcggaactgatcgacgttctgaccgaaaagttgggtacggacaggcgcacg
gctaccgcggcagtcgagcatgttgtcgacaccatcgtgcgtgcagtgcacaagggccag
agcgtcaccatcaccggattcggtgtcttcgaacagcgcaagcgtgccccccgtgtcgcc
cggaacccgcgcaccggcgaaaccgtcaaggtgaaagccacttcggtgcccgcgttccgg
cccggcgcccaattcaaggcggtgatcgcgggtaagcagaagctggccgcgaccggcccg
gccgtcaagcggggcgtgaatgcccctgtggcggccaagaagacggcggccaagaagacc
acggccgccgccaagaagaccgccgccaagaagaccaccacggccaccaaggcccccgcc
aagaagacgacggcgaccaaggccccggcgaagtcgaccgcacggaagaccaccacggcc
accaagaccgccgccaagaaggcacccgcgaagaagacgacggccaccaaggcttcggcg
accaaggcgtcggcgaccaaggccaccgcggccaagaagaccaccaccgccgccaagaag
accacggcgacgaaggccacggccgccaagaagaccacggccgcgaagaaggcgcccgcg
aagaagaccgcggccaagaagaccgccgcccgccgctga
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