Nocardia farcinica NCTC11134: ERS450000_05724
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Entry
ERS450000_05724 CDS
T04524
Symbol
cfiB
Name
(GenBank) 2-oxoglutarate carboxylase small subunit
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
nfr
Nocardia farcinica NCTC11134
Pathway
nfr00020
Citrate cycle (TCA cycle)
nfr00620
Pyruvate metabolism
nfr00720
Other carbon fixation pathways
nfr01100
Metabolic pathways
nfr01120
Microbial metabolism in diverse environments
nfr01200
Carbon metabolism
nfr01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
ERS450000_05724 (cfiB)
00620 Pyruvate metabolism
ERS450000_05724 (cfiB)
09102 Energy metabolism
00720 Other carbon fixation pathways
ERS450000_05724 (cfiB)
Enzymes [BR:
nfr01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
ERS450000_05724 (cfiB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
HMGL-like
Dala_Dala_lig_C
ATP-grasp
BSH_RND
BSH_YhbJ
ATP-grasp_3
RnfC_N
BSH_CusB
BSH_ALG44
GCV_H
NQRA_N
ATP-grasp_4
DUF6546
Motif
Other DBs
NCBI-ProteinID:
CRY83861
UniProt:
A0A0H5PMY8
LinkDB
All DBs
Position
p2:2396623..2400024
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AA seq
1133 aa
AA seq
DB search
MFSKVLVANRGEIAIRAFRAAYELGIGTVAVFPYEDRNSVHRLKAAESYQIGEQGHPVRA
YLSIDAIIDAAKTAGADAVYPGYGFLSENPDLAAACAREGITFIGPSAEVLELAGNKARA
IEAAKAAGLPVLRSSEPSADVDQLLAASRELEYPIFVKAVAGGGGRGMRRVAAPEQLREA
IEAASREAESAFGDPTVFLEQAVVNPRHIEVQILADQHGNVMHLFERDCSVQRRHQKVIE
LAPAPNLDPALRERICADAVAFARQIGYSNAGTVEFLLDERGNHVFIEMNPRIQVEHTVT
EEITDVDLVQSQLRIAAGESLADLGLSQDAVAIRGAALQCRITTEDPANGFRPDTGRITA
YRTPGGAGIRLDGGANLGAEIGAYFDSMLVKLTCRGRDLPAAAARARRALAEFRIRGVTT
NIPFLQAVLDDPDFKAGRVTTSFIDERPQLLTLRQSADRGTKILEYLADVTVNKPHGERP
TAVYPHDKLPAIDLSAPPPDGSRQRLLRLGPEGFARELRAQKAVGVTDTTFRDAHQSLLA
TRVRTSGLLQVAGHVARMTPELLSIEAWGGATYDVALRFLYEDPWERLAALREAIPNICL
QMLLRGRNTVGYTPYPEQVTKAFVREATDTGIDIFRIFDALNNVDQMRPAIDAVRETGRA
VAEVAISYTGDLSDPNENLYTLDYYLKLAEQIVDAGAHVLAIKDMAGLLRAPAAATLVTA
LRSNFDLPVHVHTHDTPGGQLATYLSAWQAGADAVDGASAPMAGTTSQPPLSAIVAAAAN
SEYDTGLNLQNVCDLEPYWEALRKVYAPFESGLPSPTGRVYTHEIPGGQLSNLRQQAIAL
GLGDRFEEIEAKYAAADRLLGRLIKVTPSSKVVGDLALALVGSGVDIDDFAADPGRYDIP
DSVIGFLRGELGTPAGGWPEPFRSKALAGRGPAKPETPLDPADEAALAGDSAERRATLNR
LLFPGPTAEFLAHREKYGDTSGLSANQFFYGLRHGEEHRVQLEKGVTLLIGLEAISEPDE
RGMRTVMCILNGQLRPVAVRDRSVAGEVPVAEKADKTNAGHVAAPFAGVVTLAVGEGDTV
AAGDTIGTIEAMKMEAAITAPRAGTVARVAIGKVQQVEGGDLLVELRLRESAD
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgaaagtcttggtcgccaatcggggcgagatcgccatccgcgcgttccgcgct
gcctacgaactcggcatcgggacggtcgccgtgttcccctacgaggatcgcaactccgtc
caccggttgaaggcggccgagtcgtaccagatcggggagcagggccatccggttcgcgcc
tacctgtcgatcgacgccatcatcgacgcggccaagaccgcgggagccgacgccgtctac
cccggctacggcttcctgtcggagaaccccgacctcgccgccgcctgcgcgcgcgagggc
atcaccttcatcggcccctcggcggaggtgctggaactggcgggcaacaaggcccgcgcc
atcgaggcggccaaggccgccgggctgccggtgctgcgctcgagcgaaccgtcggccgac
gtcgaccagctgctggcggcgtcccgcgagctggagtacccgatcttcgtgaaggcggtc
gcgggcggcggcggacgcggcatgcgccgggtcgccgcgcccgaacagttgcgcgaagcg
atcgaggcggcctcgcgcgaagccgaatcggccttcggcgacccgacggtgttcctcgag
caggccgtggtcaacccgcgccacatcgaggtgcagatcctggccgaccagcacggcaac
gtgatgcacctgttcgagcgcgactgttctgtgcagcggcgccaccagaaggtgatcgag
ctggcgcccgcgccgaacctggatcccgcgctgcgcgagcgcatctgcgccgacgcggtg
gccttcgcccgccagatcggctacagcaacgcaggcaccgtggaattcctgctcgatgag
cgcggcaaccacgtcttcatcgagatgaacccgcgcatccaggtcgagcacaccgtgacc
gaggagatcaccgatgtcgacctggtgcagtcgcagctgcgcatcgccgccggggagagc
ctggccgacctcggcctgagccaggacgcggtggccatccgcggcgcggcgctgcaatgc
cgcatcaccaccgaggatccggccaacggcttccgccccgacaccggccgcatcaccgcc
taccgcacccccggcggcgcgggcatccgcctcgacggcggcgccaacctcggcgcggag
atcggcgcctacttcgactccatgctggtcaagctcacctgccgcggccgcgacctgccc
gccgccgccgcgcgggcccggcgcgcgctggccgagttccgcatccgcggcgtcaccacc
aacatcccgttcctgcaggccgtgctcgacgaccccgacttcaaggcgggccgggtcacc
acctcgttcatcgacgagcggccgcagctgctgacgctgcgtcagagcgccgaccgcggc
accaagatcctcgaatacctggccgacgtcacggtcaacaagccgcacggcgagcgcccg
accgcggtctacccgcacgacaagctgcccgccatcgacctgagcgcgccgccgccggac
ggctcgcggcagcggctgctgcgcctcggcccggagggcttcgcccgcgagctgcgcgcg
cagaaggccgtcggcgtcaccgacaccaccttccgcgacgcgcatcagtcgctgctcgcg
acgcgggtgcggaccagcggcctgctccaggtcgccggccacgtggcacggatgacgccg
gaactgctctcgatcgaggcgtggggcggggccacctacgacgtggcgctgcgcttcctc
tacgaggatccgtgggagcggctggccgcgttgcgcgaggcgatccccaacatctgcctg
cagatgctgttgcgcgggcgcaacaccgtcggctacacgccgtatccggaacaggtgacc
aaggcgttcgtgcgggaggccaccgacaccggcatcgatatcttccgcatcttcgacgcg
ctcaacaacgtcgaccagatgcgccccgccatcgacgccgtgcgcgaaaccggccgcgcc
gtcgcggaagtggcgatcagctacaccggtgacctgtcggacccgaacgagaacctctac
accctcgactactacctcaagctggccgagcagatcgtcgacgcgggcgcgcacgtgctc
gcgatcaaggacatggccgggctgctgcgcgcgccggcggcggccaccctggtcaccgcg
ctgcgcagcaacttcgacctgcccgtgcacgtgcacacccacgacaccccgggcggtcag
ctcgccacctacctgtcggcgtggcaggccggcgccgacgccgtcgacggcgcgagcgcg
ccgatggcgggcaccaccagccagccgccgctgtcggcgatcgtggccgccgcggccaac
agcgagtacgacaccggcctgaacctgcagaacgtctgcgacctggagccgtactgggag
gcgctgcgcaaggtgtacgcgcccttcgagtccggactgccctcgcccaccggtcgcgtc
tacacccacgagatccccggcggtcagctgtcgaacctgcgccagcaggccatcgcgctc
ggcctgggcgaccgcttcgaggagatcgaggccaagtacgccgccgcggatcggctgttg
ggccgcctgatcaaggtgaccccgtcgtcgaaggtggtcggcgatctggcgctcgcgctg
gtcggctccggcgtggacatcgacgatttcgccgccgacccgggccgctacgacatcccg
gactcggtgatcggcttcctgcgcggcgaactcggcactcccgcgggcggctggcccgag
ccgttccgcagcaaggcgctggccgggcgcggacccgccaagcccgagaccccgctcgat
ccggccgacgaggccgccctggcgggtgactccgccgagcgcagggcgacgctcaaccgg
ttgctgttccccggacccaccgccgaattcctcgcccaccgcgagaagtacggcgacacc
tccgggctctcggccaaccagttcttctacggcctgcgtcacggcgaggaacaccgggtg
cagctggagaagggcgtcaccctgctcatcgggctggaggccatctccgagccggacgag
cgcggtatgcgcaccgtcatgtgcatcctcaacggccagctgcgcccggtcgcggtgcgc
gaccgctcggtggccggtgaggtgccggtcgcggagaaggcggacaagaccaacgccggt
cacgtggccgcgccgttcgccggtgtggtgaccctggccgtcggcgagggcgacaccgtc
gcggcgggcgacaccatcggcaccatcgaggcgatgaagatggaggccgccatcaccgcg
ccccgcgcgggcaccgtcgcccgggtcgccatcggcaaggtgcagcaggtcgagggcggt
gacctgctggtggaactgcggctgcgcgagtccgcggactga
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