Nocardia farcinica NCTC11134: ERS450000_05747
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Entry
ERS450000_05747 CDS
T04524
Symbol
smc
Name
(GenBank) Chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
nfr
Nocardia farcinica NCTC11134
Brite
KEGG Orthology (KO) [BR:
nfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfr03036
]
ERS450000_05747 (smc)
Chromosome and associated proteins [BR:
nfr03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
ERS450000_05747 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CRY83903
UniProt:
A0A0H5P8Z2
LinkDB
All DBs
Position
p2:2418303..2421914
Genome browser
AA seq
1203 aa
AA seq
DB search
MHLKSLTLKGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKALRGGK
MQDVIFAGTAGRAPLGRAEVTLTIDNSDGALPIDYAEVSITRRMFRDGAGEYEINGNSCR
LMDVQELLSDSGIGREMHVIVGQGQLSAILESRPEDRRAFVEEAAGVLKHRKRKEKAVRK
LEAMQANLARLTDLTTELRRQLKPLGRQAEVARRAQTVQADLRDARLRLAADDLVTRRAE
LASQQSKEAYAREQQITVQSELDAANAALAQQEFELSKLTPSAEAAAQTWFQLSALTERV
NATIRIAGDRARHLDTQAPVGTGRDPDQLEAEADRVEAEEAELREAVEIAAETLEAARDQ
LAEREHAAKAAEQAHLAAVRAIADRREGLARLTGQVENLRTRAQSVDAEIARLSVAIAEA
RRRGESAQAEFDGVQAELSELDAGEEGLDAQHEHAVQALELADERVRELREQDRDASKRV
ASLTARIEALGMGLARRDGSAWLVEHHPEGLRGPLSELLRVRAGFEAAVAAVLGPVADAV
AADTAPAAHAAIRALKDADGGRAALVFGAAAGDEPAGEPLPAGAHRLTDVVDCPAELRAG
IRALTADVAVVDDLDTAAALLAQRPDLRVVTRDGDLTGTGWLIGGSDRAPSQLEIQADID
AAKAELVAAQRHAEELEAALAGALAEQADRKEAVDHALMALHESDQAMIAIYDRLGRLGQ
SARSAQTEAERLTGQRADAEASREETLAALAELEERLRNAEHEQAAVDEGAGTAGTEAAA
RVREEAAAALAEARSMEVEARLAVRTAEERAESVRGKADSLRRAARAEREARARAERAQA
ARRQAAAVAAAVAESGARIAGELEKVVAAAAARRDELVRRRTECAAQVEQTKERVRALTT
QLAQLTDAVHRDEVAKAQAALRIEQLEATIAEQFGIALPDLIAEYGPDVPLPPSDLEWQE
YEQAKERGEQVSAPQPMPYDRAEQERRAKRAEKDLATLGKVNPLALEEFAALEERYNFLA
TQLEDVKNARKDLLDVVAEVDARILQVFTEAYADVEREFVQVFSTLFPGGEGRLLLTDPS
DMLTTGIEVEARPPGKKVKRLSLLSGGEKSLTAVALLVAIFRARPSPFYVMDEVEAALDD
TNLRRLIGLFEQLREKSQLIVITHQKPTMEIADALYGVSMRGDGITQVISQRLRGENLTP
AAT
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttgcacctgaagagcctgacgttgaagggattcaaatccttcgcgtccgcgacgacgttg
cgcttcgagcccgggatcacctgcgtggtcgggcccaacggctccggcaaatccaacgtc
gtcgacgcgctcacctgggtgatgggcgagcagggcgccaaggccctgcgcggcggcaag
atgcaggacgtcatcttcgcgggcaccgcgggccgcgcaccgctcggtcgcgccgaagtc
accctgaccatcgacaactccgacggcgcgctgcccatcgactacgccgaggtgtccatc
acccggcgcatgttccgcgacggcgcgggcgaatacgagatcaacggcaactcgtgccgc
ctgatggacgtgcaggaactgctcagcgactccggcatcggccgggagatgcacgtcatc
gtcggacagggccagctctccgcgattctcgaatcgcggccggaggaccgccgcgccttc
gtcgaggaggccgcgggcgtgctcaaacaccgcaagcgcaaggagaaggcggtccgcaag
ctggaggccatgcaagccaacctcgcgcgcctgaccgacctcaccaccgaattgcgccgt
cagctcaaaccgctgggccgccaggccgaggtggcccgccgcgcccagaccgtgcaggcc
gacctgcgtgatgcccgcctgcggctggcggccgacgacctggtgacgcgccgggcggag
ctggccagccagcagagcaaggaagcctacgcccgcgagcagcagatcaccgtgcagtcc
gagctggatgccgccaatgccgcgctggcgcagcaggagttcgagctgtccaagctcacg
ccgagtgccgaggccgccgcgcagacctggttccagctctccgcgctgaccgaacgggtg
aacgccaccatccgcatcgccggtgaccgggccaggcatctcgacacccaggcaccggtc
ggcaccggccgcgaccccgaccagctggaggccgaggccgaccgcgtcgaggcggaggag
gcggaactgcgcgaggcggtggagatcgccgccgagacactggaggcggcgcgcgaccag
ctggccgagcgcgagcacgccgccaaggcagccgaacaggcgcacctggcggcggtccgg
gcgatcgccgaccggcgcgaggggctggcgcgcctgaccggccaggtggagaacctgcgc
acgcgcgcccaatcggtcgatgccgagatcgcgcggctctcggtcgcgatcgcggaggcg
cgcaggcgcggggagagcgcacaggccgaattcgacggcgtgcaggcggaattgagcgaa
ctcgacgcgggcgaggaggggctggacgcccagcacgagcacgccgtgcaagcgctcgag
ctggccgacgagcgggtccgcgaactgcgcgagcaggatcgcgacgcgagcaagcgggtc
gcctcgctcaccgcccggatcgaggcgctcggcatggggctggcgcggcgcgacgggtcg
gcctggctggtcgaacaccaccccgaggggttgcgcggcccgctgtcggagctgctgcgc
gtgcgcgccgggttcgaagcggcggtggccgcggtgctcggtccggtcgccgatgccgtc
gccgccgacaccgcaccggccgcgcacgccgccatccgcgcactcaaggacgccgacggc
ggccgggcggccctggtgttcggcgccgccgccggggacgagcccgcgggcgagccgctg
cccgcgggcgcgcatcggctcaccgacgtcgtcgactgtcccgccgagctgcgcgcgggc
atccgcgcgctcaccgccgacgtcgcggtcgtcgacgacctcgataccgccgccgcgctg
ctggcgcagcggcccgacctgcgggtggtcacccgcgacggcgatctcaccggcaccggc
tggctcatcggcggctccgaccgggcgccgagccagctcgagatccaggccgacatcgac
gccgcgaaggccgaactcgtcgccgcccagcggcacgccgaggaactcgaggcggcgctg
gcgggggcgctcgccgaacaggccgaccgcaaggaggccgtcgaccatgcgctgatggca
ttgcacgaatccgaccaggcgatgatcgccatctacgaccggctcggcaggctcggccag
tccgcccggtcggcgcagaccgaggccgaacgactgaccggccagcgggccgacgccgag
gcgagccgggaggagacgctggccgccctcgccgaactggaggaacgcctgcgcaacgcc
gagcacgagcaggccgccgtcgacgagggcgccggcaccgcgggcaccgaggccgccgcc
cgggtccgggaggaggccgccgccgccctcgccgaggccaggtcgatggaggtggaggcc
aggctcgcggtacgcaccgccgaggaacgcgccgaatcggtgcgcggcaaggcggattcg
ctgcgtcgcgcggcccgcgccgaacgggaggcgcgagccagggccgagcgcgcgcaggcc
gcccgcaggcaggccgccgccgtggccgccgccgtcgccgagtccggcgcgcgcatcgcg
ggcgaactggagaaggtggtcgcggcggccgccgcccgccgcgacgagctggtgcgcagg
cgcaccgaatgcgcggcccaggtggagcagaccaaggagcgggtgcgcgcactgaccacc
cagctggcccagctcaccgacgccgtgcaccgcgacgaggtcgccaaggcgcaggccgcg
ctgcggatcgagcagctcgaggccaccatcgccgaacagttcggtatcgccctgcccgac
ctcatcgccgaatacggtccggacgtgccgctgccgccctcggatctggaatggcaggag
tacgagcaggccaaggagcggggtgagcaggtcagcgccccgcagccgatgccgtacgac
cgggccgagcaggagcgccgcgcgaagcgcgccgagaaggatctggccacgctgggcaag
gtgaacccgctcgcgctcgaggagttcgcggcgctcgaggagcgctacaacttcctggcc
acccagctcgaggacgtcaagaacgcgcgcaaggacctgctcgacgtggtcgcggaggtg
gacgcgcgcatcctgcaggtgttcaccgaggcctacgccgacgtggagcgggagttcgtg
caggtgttctcgacactgttccccggcggtgagggcaggctgctgctcaccgacccctcc
gacatgctcaccaccggcatcgaggtggaggcccgcccgcccggtaagaaggtcaagcgg
ctgtcgctgctgtccggcggggagaagtcgctcaccgctgtcgcgctgctcgtggcgatc
tttcgcgcccgcccctccccgttctacgtgatggacgaggtggaggccgcgctggacgac
accaacctgcgccggttgatcgggttgttcgagcaactgcgggagaagagccagctgatc
gtcatcacccaccagaagccgacgatggagatcgccgacgccctctacggcgtcagcatg
cgcggcgacggcatcacccaggtgatctcgcagcgtctgcgcggggagaacctgacaccc
gccgcgacctga
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