Nonomuraea fuscirosea: OIE67_03560
Help
Entry
OIE67_03560 CDS
T09742
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nfs
Nonomuraea fuscirosea
Pathway
nfs03030
DNA replication
nfs03430
Mismatch repair
nfs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OIE67_03560 (dnaE)
03430 Mismatch repair
OIE67_03560 (dnaE)
03440 Homologous recombination
OIE67_03560 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfs03032
]
OIE67_03560 (dnaE)
03400 DNA repair and recombination proteins [BR:
nfs03400
]
OIE67_03560 (dnaE)
Enzymes [BR:
nfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OIE67_03560 (dnaE)
DNA replication proteins [BR:
nfs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OIE67_03560 (dnaE)
DNA repair and recombination proteins [BR:
nfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OIE67_03560 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WSA53728
LinkDB
All DBs
Position
778906..782457
Genome browser
AA seq
1183 aa
AA seq
DB search
MSKSFVHLHVHTEYSMLDGAAKLKPLFKEAERLEMPAIAMSDHGNMFGAYEFQKVAAGSP
VKPIIGIEAYVAPHSRFVKKPVFWGQRAETGVADGEGGKDVSGGGRFTHMTMWAKDADGL
RNLFRLSSLASFEGYYSKPRMDQDLISQHASGIIATTGCPSGAVQTRIRLGQYDEAVRVA
GEYQEIFGKENYFLELMDHGINIEREVREDLLRLARQLNIPLLATNDSHYVTEDQADAHD
SLLCVGVGKNKDDPNRFRFNGSGYYLKSADDMYRLFPELAEACDNTLLVAEMIGDYGDVF
KQVDRMPDYPDVPEGETQESWLRKECEAGLAMRYGTPIPAEVMERYETEMKVIGPMGFSS
YFLVVADICKYARDNGIPVGPGRGSATGSIVAYATRITELDPLEHGLLFERFLNPERINP
PDVDLDFDDRQRDRMVAYVTEKYGSEFTAQVNTFGTIKAKAAVKDASRILGYPFAMGDKI
TKAMPPDVMGKGVPLADMFNEDHPRYNEGTELRALYENDPDVRKVIDTGRGIEGLIRGTG
VHAAAVILSSTPLLDLIPMHKRDKDGVVITGFDYPSCEDMGLVKMDFLGLRNLGIIDHAI
KIIKQNRGVELDTLTMPLDDTKTYQLLARGDTLGVFQLDGGPMRQLLKLMEPTRFEDIAA
VLALYRPGPMAANAHTNYAHRKNARQDIEPIHPELKEALEPILGPTFHLLVYQEQIMAVA
RELAGYSLGGADLLRRAMGKKKPEILAKEFANFQAGMRGNGYSDEAIQALWDVMLPFSGY
AFNKSHTAGYGLVAYWTAYLKANYPAEYMAALLTSVGDDKDKAAVYLAECRKMGIQVLPP
DVNDSQLDFVAVGDTQVRFGMGAVRNVGENVVDGIVKARLEKGRFTDFNDFLAKVPLTAC
NKRVIESLIKAGAYDSMAHPRKGLLMIHEQAVESVIDIKKNEAHGQDSLFGGMDDADDDA
AFTIAIPDTEWDKKTKLDFEREMLGLYVSDHPLAGTERLLARNRDTTIVDLLDSGRDDRG
DVRVAGLVTKVDRRVNKAGNTWAILTVEDMDAAVECLFFPRSYELYGPELRPDIVVSVAG
QINNRDGAISIFANEMAIIDVSGVNESGAPITLLLREERITPTLLDELRQVLKMHQGQVP
LQVNLRRPAGKVMVMALPEWPVNAEPSFAADIKALLGPEALSL
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaagtcgttcgtgcatctgcacgtccacaccgagtacagcatgctggacggagcg
gccaagctgaagccgctgttcaaggaggccgagcggctggagatgccggcgatcgcgatg
agcgatcacggcaacatgttcggtgcgtacgagttccagaaggtcgccgccggatccccg
gtcaagccgatcatcgggatcgaggcgtacgtggcgccgcacagccggttcgtgaagaag
ccggtgttctgggggcagcgcgcggagaccggggtggcggacggcgagggcggcaaggac
gtctccggcggcggccggttcacccatatgacgatgtgggccaaggacgcggacgggctg
cggaacctgttccggctgtcgtcgctcgcctcgttcgagggctactactccaagccccgc
atggaccaggacctgatctcgcagcacgcctccgggatcatcgccacgaccggttgcccc
tccggcgcggtgcagaccaggatccggctcggccagtacgacgaggccgtccgggtggcc
ggcgaataccaggagatcttcggcaaggagaactacttcctggagctgatggaccacggc
atcaacatcgagcgtgaggtgcgcgaggacctgctccggctggccaggcagctcaacatc
ccgctgctcgccaccaacgactcccactacgtgaccgaggaccaggccgacgcgcacgac
agcctcctgtgcgtcggcgtgggcaagaacaaggacgaccccaaccggttccggttcaac
gggtccggctactacctcaagtccgccgacgacatgtaccgcctgttccccgagctggcc
gaggcgtgcgacaacaccctgctcgtggccgagatgatcggcgactacggcgacgtgttc
aagcaggtggaccggatgccggactatccggacgtgcccgagggggagacacaggagtcc
tggctgcgtaaggagtgcgaggccggactggcgatgcggtacggcaccccgatccccgcc
gaggtgatggagcgctacgagaccgagatgaaggtcatcggcccgatggggttctcctcc
tacttcctcgtggtcgccgacatctgcaagtacgcccgcgacaacggcatcccggtcggg
ccgggacgaggatcggccaccggcagcatcgtggcgtacgccacccgcatcaccgagctc
gacccgctggagcacggcctgctgttcgagcggttcctcaaccccgagcggatcaacccg
cccgacgtcgacctcgacttcgacgaccgccagcgcgaccgcatggtggcctacgtcacc
gagaagtacggcagcgagttcaccgcgcaggtcaacacgttcggcaccatcaaggccaag
gccgccgtcaaggacgccagccggatcctcggctacccgttcgcgatgggcgacaagatc
accaaggcgatgccgccggacgtcatgggcaagggcgtcccgctcgcggacatgttcaac
gaggaccacccgcgctacaacgagggcaccgaactgcgcgccctgtacgagaacgacccc
gacgtgcgcaaggtcatcgacaccggccgcggcatcgaggggctgatccgcggcaccggc
gtgcacgccgccgccgtcatcctgtcctccaccccgctgctcgacctgatccccatgcac
aaacgggacaaggacggcgtcgtcatcaccgggttcgactacccgtcgtgtgaggacatg
ggcctggtcaagatggacttcctgggcctgcgcaacctgggcatcatcgaccacgccatc
aagatcatcaagcagaaccggggtgtcgagctggacaccctgacgatgccgctcgacgac
accaagacataccagctgctggcccgcggcgacacgctcggcgtgttccagctcgacggc
ggccccatgcggcagctcctgaagctgatggagccgacccggttcgaggacatcgccgcc
gtgctcgccctctaccggccgggcccgatggcggccaacgcgcacaccaactacgcccac
cgcaagaacgcccgccaggacatcgagccgatccatccggagctcaaggaggcgctggag
ccgatcctcgggccgaccttccatctgctcgtctaccaggagcagatcatggccgtcgcc
cgtgagctggccggctactcgctcggcggcgccgacctgctgcgccgcgccatgggcaag
aagaagcccgagatcctggccaaggagttcgccaacttccaggccggcatgcgcggcaac
ggctacagcgacgaggccatccaggcgctgtgggacgtcatgctgcccttctccgggtac
gccttcaacaagtcgcacaccgccggctacggcctcgtcgcctactggaccgcctacctc
aaggccaactaccccgccgagtacatggccgccctgctcacctccgtcggcgacgacaag
gacaaggcggccgtctacctggccgagtgccgcaagatgggcatccaggtgcttccgccg
gacgtcaacgactcccagctcgacttcgtcgcggtcggagacacgcaggtccggttcggc
atgggcgcggtccgcaacgtcggtgagaacgtcgtggacgggatcgtcaaggcccgcctg
gagaaggggcgcttcaccgacttcaacgacttcctcgccaaggtgccgctcacggcctgc
aacaagcgcgtcatcgagtcgctgatcaaggcgggcgcgtacgactccatggcgcacccg
cgcaagggcctgctgatgatccacgagcaggcggtcgagtccgtcatcgacatcaagaag
aacgaggcgcacggccaggactccctgttcggcggcatggacgacgcggacgacgacgcg
gcgttcacgatcgccatccccgacacggagtgggacaagaagaccaagctcgacttcgag
cgggagatgctcggcctgtacgtgtcggaccacccgctggccggcaccgaacggctgctc
gcccgcaaccgggacaccacgatcgtcgacctgctcgactccgggcgcgacgaccgcggc
gacgtccgcgtggccgggctggtcacgaaggtggaccggcgggtgaacaaggcgggcaac
acgtgggccatcctcacggtggaggacatggacgccgccgtcgaatgcctgttcttcccc
cgcagctacgagttgtacgggccggaactgcggccggacatcgtggtgtcggtcgccggc
cagatcaacaaccgcgacggcgccatcagcatcttcgcgaacgagatggccatcatcgac
gtgtccggggtcaacgagtccggcgcgccgatcaccctgctcctgcgcgaggaacgcatc
acgccgaccctgctggacgagctgcggcaggtcctgaagatgcaccagggccaggtgccg
ctccaggtcaacctgcggcggccggccggcaaggtcatggtgatggcgctgccggagtgg
ccggtcaacgccgagccgagtttcgccgccgacatcaaggcgctactcggcccggaggcg
ctgtcgctgtga
DBGET
integrated database retrieval system
