Nonomuraea fuscirosea: OIE67_03610
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Entry
OIE67_03610 CDS
T09742
Name
(GenBank) type IV secretion protein Rhs
Organism
nfs
Nonomuraea fuscirosea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
SpvB
Motif
Other DBs
NCBI-ProteinID:
WSA53738
LinkDB
All DBs
Position
792220..798399
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AA seq
2059 aa
AA seq
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MSWNAFRDVAKPVSAWPRRLAAALSMVLVVPLVNAMPAYAAPRSAPAVQKETPVKGTSVP
VQPPEADPVAERAWKAAPAVTWPKPQKAELGSSKAPAGFPVRLAADKSGNRSSDQSGDPV
SVELLDTDRLGLAMRVSPGQGVAAARAGGRKTELKIDYSGFRYAYGGDYGARLGMVKLAE
CALQSATATAECPQPEPVRSSNDPKTGTLSAQVETGAVYALAAAPSGQSGDHSATSLSAS
SDWSVGTQTGDFSWSYDLRTPPALGGEEPELSLSYSSQSVDGRTASTNNQASWAGDGFEF
SPGGYIERRYKSCSIDGRKTGDLCWDQENAVLSLDGSSIELVKDATSKQWRPKRDDGTRI
ELLTGATNGDNNGEYWRVTTADGTQYSFGLNRLPGWASGKAETKSVQTVPVFGNNSGEPC
YSSTPANAWCQQGYRWNLDYEVDTHGNAATYWYTQEKNYYGRNSKPEQGTVYDRHAYLTR
IDYGYLSNELFTRNPASRVLFETAERCLPSGTVTCAPGELKKETASHWPDVPFDQICDSG
VKCTDRLAPTFFTRKRLTKVTTQVLNAAGQYYPVDSWALTHQFPATGDGLSPALWLASIQ
QTGHVGGTITLPKTTFKGVQLPNRVDATEGRAPLVKWRVQSVDNGTGGELRVNYKAADCQ
AGALPAADKNTKLCFPQRWSPPNEAEVTDWFHKYVVAQTVEVDRVAASPNVVTSYEYLDG
AAWRYADNILVKPAHRTWSDFRGFGRVRVRSGDGQDTKRTLTEFRYFRGMHGDKQADGSK
RNVQVVDSEGVKLDDLDQYSGFEREEMLYDGDGGSLLKATVEAPWSVKTAESTQDGVTKA
AYVVEAESMVTRTALPGGKWRRTGEARTYDAKGLLTTVEEKGDLAGTDDDRCTRYTYARN
DTSWMLDYTSRVQKVAAPCSASMSTLAAGELISDEKVQYDGKAFGQAPSKGDVTAVQQVV
NADGSTVTDTAHTYDVYGRETSETDTVGTKSVTSYTPATGALPTEIKETNDLGHVDRTII
EPAWGEPVTEIDTNNRRVDMEHDALGRLTKVWQSDRSKAGGQSPNTEYSYTMRADGPSVV
TTRTLRADGGYTESHELYDGLMRERQTQEPAPTDDQTQDPALRDGRTITDTFYNSQGEDY
KQNTGYFATGAPSTALLAVADADVPNQVETLFDGVGDAKAQLLKAKGVEKYRVTAQDDGD
RVHTTPPPGGTATTRIGDAEDRLIELRQYKGATPTGEYEATKYTYDHAGRLSTVTDPAGN
VWKHHYDFRGREIKTEDPDKGVTTMTYNDADELVSTTDSRGKTLWYVYDALGRKTEMREG
SATGPLLAEWKYDALAKGHLNASIRYVDGQAYKAEINAIDADYRPLRETVTIPAREGKLA
GSYQLNTRYTLDGQVQSVSFPAAGGLAEEQVVYSYDALSQPVKVTGLSAYVNATRYSKLG
ETLQYELGDNGKKTWLTYTHDESTRRLTSMRLDRQNTTKTDLDVNYSYDAVGNITKINDR
ANQDTQCFTYDHLRRLTSAWAATDDCASGSPQSGKIGGVAPYAVSYAYDVTGNRTKETKH
AFGGAGEQVRDYTYPAAGGKQPHALQAVGADVFAYDAAGNTTRRKVGTSDQNLVWDAEGN
LESVTEAGKTTSFVYDAEGDRLIRKTPTDATLYIDDMELRLDHAKDVVEQTRYYTIGDEP
IAVRTPDDQVYFLASDHQGTAQAAVNAGTGDLAVRRQTPFGEDRGAPPPWWPGQRGFVGG
TKDASTGLVHLGAREYDPRLGRFLSVDPIIDDTDPQQLNAYAYANNSPVSMSDPDGQWVW
VVVGIGVRVGVKWWLKKQAKKKARELALRKARELARKKALEEAKRKAREEAKRKAKEEAK
RKAAREEAKRKLKEAAKKRAAEKKRRAREAAQRRRAAAKARREARRAEREAAFKRRMAKA
AQRRNRRAGRLPAGIQHARSRPARRPTSHRSTQRQSPPKASRQPAQPRPSQVYRNDGSVQ
PTQSYTVYGNGRMYPQGRPPSNLPNGGGSGQGQRQIFRPEKIEMEVNTRRGAMGHLGMRG
GKLGDDFADFLDTFLGGLG
NT seq
6180 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggaacgccttccgggacgtggccaagcccgtgtccgcatggccgcgccggctg
gcggccgctctgtcgatggtcctcgtggtgcctctggtcaacgccatgcccgcctacgcg
gcgccgcgttcggccccggcggtgcagaaggagaccccggtcaagggcacgagcgtgccg
gtccagccgccggaggcggatcccgtcgccgaacgggcgtggaaggcggcgccggcggtc
acctggcccaagccgcagaaggcggagctggggagcagcaaggctcccgcagggttcccc
gtgcgactggccgccgacaagagcggcaaccgcagcagcgaccagagcggcgatccggtg
agcgtggagctgctcgacaccgaccggctcggcctggccatgcgggtgtccccgggccag
ggcgtcgcggccgccagggcgggcggcagaaaaaccgagctgaagatcgactactccggt
ttccgttacgcctacggcggcgactacggcgcccggctcggcatggtcaaactcgcggaa
tgcgcgctccagtcggccaccgccacggccgaatgcccgcagccggagccggtcaggagc
agcaacgacccgaagaccggcacgctgagcgcccaggtcgagaccggcgccgtgtacgcg
ctggccgccgccccctccggccagtccggcgaccactccgccacctccctgtcagcctcg
tccgactggagcgtcggcacgcagaccggcgacttctcctggagctacgacctgcgcacc
ccgcccgcgctgggcggggaggagccggagctgtcgctctcctactcctcgcagagcgtg
gacggccgcaccgcctccaccaacaaccaggcgtcctgggccggtgacggcttcgagttc
agccccggcggctacatcgagcgccgctacaagtcctgctcgatcgacggcaggaagacc
ggcgacctgtgctgggaccaggagaacgccgtcctgtcgctggacggctcgtccatcgag
ctggtcaaggacgccaccagcaagcagtggcggccgaagcgggacgacggcaccaggatc
gagctgctgaccggtgccacgaacggcgacaacaacggcgagtactggcgggtcaccacc
gcggacggcacccagtacagcttcggcctgaaccggctgcccggctgggccagcggtaag
gccgagaccaagtcggtgcagacggtgccggtgttcggcaacaacagcggtgagccctgt
tacagcagcactccggccaacgcctggtgccagcagggttaccggtggaacctcgactac
gaggtggacacgcacggcaacgccgccacgtactggtacacccaggagaagaactactac
ggccggaactcgaagcccgagcagggcaccgtgtacgaccggcacgcgtacctgacccgc
atcgactacggctacctgagcaacgagctgttcaccaggaatccggcgtcccgggtgctg
ttcgagacggccgagcgctgcctgcccagcggcaccgtcacctgcgcgcccggcgagctg
aagaaggagaccgcgagccactggccggacgtcccgttcgaccagatctgcgactcgggg
gtgaagtgcaccgaccggctcgcgccgacgttcttcacccgcaagcggctgaccaaggtc
accacccaggtgctcaacgccgccggtcagtactacccggtggactcctgggcgctgacg
caccagttccccgccaccggtgacgggctgagcccggcgctgtggctggcctccatccag
cagaccggtcacgtgggcggcacgatcacgctgccgaagaccacgttcaagggcgtgcag
ctgcccaaccgggtggacgccaccgagggccgcgcgccgctggtcaagtggcgcgtccag
tccgtcgacaacggcacgggcggcgagctgagggtcaactacaaggccgccgactgccag
gccggcgcgctgcccgccgccgacaagaacaccaagctctgcttcccgcagcgctggtcc
ccgccgaacgaggcggaggtcaccgactggttccacaagtacgtggtggcgcagacggtc
gaggtcgaccgggtggccgcctccccgaacgtggtcaccagctacgagtacctggacggc
gccgcctggcggtacgccgacaacatcctggtcaagcccgcacaccgcacctggtcggac
ttccgcggcttcggccgggtccgggtccgttcgggcgacggccaggacaccaagcgcacg
ctgacggagttccgctacttccgcggcatgcacggcgacaagcaggccgacggctccaag
cgcaacgtgcaggtggtcgactccgagggcgtcaaactggacgacctcgaccagtactcc
ggcttcgagcgcgaggagatgctgtacgacggcgacggcggctccctgctgaaggccacc
gtcgaggcgccgtggtcggtcaagaccgccgaatccacccaggacggcgtcaccaaggcc
gcgtacgtggtcgaggccgagtccatggtcacccgtaccgcgctgcccggcggcaagtgg
cggcgtaccggcgaggcgcgtacgtacgacgccaagggtctgctcaccacggtcgaggag
aagggcgacctggccggcaccgacgacgaccggtgcacccgctacacctacgcccgcaac
gacacgagctggatgctcgactacaccagccgcgtacagaaggtggccgctccctgctcc
gcctccatgtccacgctcgccgccggagagctgatctcggacgagaaggtccagtacgac
ggcaaggcgttcgggcaggcgccgagcaagggcgacgtgaccgcggtgcagcaggtcgtc
aacgccgacggcagcacggtcaccgacaccgcgcacacgtacgacgtctacggccgcgag
accagcgagaccgacacggtcggcaccaagtccgtgaccagctacaccccggccacgggc
gccctgccgaccgagatcaaggagacgaacgacctcggccacgtcgaccgtacgatcatc
gagccggcctggggcgagcccgtcaccgagatcgacaccaacaaccgccgcgtcgacatg
gagcacgacgcgctgggccgcctgaccaaggtctggcagtccgaccgcagcaaggcgggc
gggcagtcgcccaacaccgagtactcctacacgatgcgggccgacggccccagcgtcgtc
accaccaggacgctgcgcgccgacggcggctacaccgagagccacgagctctacgacggc
ctgatgcgcgagcgccagacccaggagccggcgcccacggacgaccagacgcaggacccg
gccctgcgcgacggccgcacgatcaccgacaccttctacaactcccagggcgaggactac
aagcagaacaccggctacttcgccaccggcgcgccgtccaccgccctgctcgcggtggca
gacgcggacgtgccgaaccaggtcgagacgctgttcgacggcgtgggcgacgccaaggcc
cagctgctcaaggccaagggcgtggagaagtaccgggtcaccgcccaggacgacggcgac
cgggtgcacacgacgccgccgccgggcggcacggccaccacccgcatcggcgacgccgag
gaccggctgatcgagctgcgccagtacaagggcgcgaccccgaccggcgagtacgaggcc
accaagtacacctacgaccacgcgggacgcctgtccacggtcaccgacccggcgggcaac
gtctggaagcaccactacgacttccgcggccgggagatcaagaccgaggacccggacaag
ggcgtcacgacgatgacgtacaacgacgccgacgagctggtctccacgaccgactcacgc
ggcaagaccctctggtacgtctacgacgccctgggccgtaagaccgagatgcgcgaaggc
tcggcgaccggcccgctgctggccgagtggaagtacgacgcgctggccaagggacacctg
aacgccagcatccggtacgtggacgggcaggcgtacaaggcggagatcaacgccatcgac
gccgactaccgcccgctgcgcgaaaccgtcaccatcccggcgcgggagggcaagctggcg
ggctcctaccagctcaacacccgctacacgctcgacggccaggtgcagtcggtcagcttc
ccggccgccggagggctggccgaggagcaggtcgtctacagctacgacgcgctcagccag
ccggtcaaggtcacgggcctgtcggcgtacgtgaacgcgacccgctactccaagctcggc
gagaccctgcagtacgagctgggcgacaacggcaagaagacctggctcacctacacccac
gacgagtccacccgcaggctgaccagcatgcggctggaccgccagaacacgaccaagacc
gatctggacgtcaactacagctacgacgccgtcggcaacatcaccaagatcaatgatcgg
gcgaaccaggacacgcagtgcttcacctatgaccacctgcgccggttgacctcggcgtgg
gcggccacggacgactgcgcgagcggttcaccgcagtccggcaagatcggcggcgtggcc
ccgtacgcggtcagctacgcctacgacgtcaccggcaaccggacgaaggagaccaagcac
gccttcggcggcgcgggcgagcaggtgcgcgactacacctatcccgcggcgggcggcaag
cagccgcacgcgctgcaggccgtcggggcggacgtgttcgcctacgacgcggccggcaac
accacccggcgcaaggtcggcacctccgaccagaacctggtgtgggacgccgagggcaac
ctggagtcggtgaccgaggccggcaagaccacgtcgttcgtctacgacgcggagggcgac
cggctgatccgcaagacgccgacggacgccaccctctacatcgacgacatggagctgcgt
ctcgaccacgccaaggacgtcgtcgagcagacccgctactacaccatcggcgacgagccc
atcgcggtccgcacgccggacgaccaggtgtacttcctggccagcgaccaccagggcacc
gcgcaggccgcggtgaacgccggcaccggcgacctggccgtgcgcaggcagaccccgttc
ggtgaggaccgcggcgcaccaccgccgtggtggccgggccagcgcgggttcgtcggcggc
acgaaggacgcctcgaccgggctcgtccacctgggcgcccgcgagtacgacccgaggctc
ggccggttcctgtcggtggacccgatcatcgacgacaccgatccgcagcagctcaacgcc
tacgcctacgccaacaacagccccgtcagcatgagcgaccccgacgggcagtgggtgtgg
gtcgtggtcgggatcggcgtccgcgtcggcgtcaagtggtggctgaagaagcaggccaag
aagaaggcacgcgaactcgcgctcaggaaggccagggaactggccaggaagaaggcactg
gaggaggccaagaggaaggccagagaggaggccaagaggaaggccaaggaggaggccaag
aggaaggccgccagagaggaggccaagcgcaagctcaaagaggcggccaagaaacgcgcg
gcagagaagaagaggcgggcccgcgaggcggcgcagcggcgccgggcggcggccaaggcc
cgccgggaggcgaggagggccgaacgcgaggcagcgttcaagcgtcgcatggccaaggcc
gcccagcggcgcaaccgccgggccggccgtctcccggccggcatccagcacgcgcgctcg
cgtcccgccaggcggcccacgagccaccgctccacccagcggcagtcaccgccgaaggcg
agcaggcagccggcacagccacggcccagccaggtctaccgcaacgacggcagcgtgcag
ccgacccagtcgtacaccgtgtacggcaacggccggatgtacccgcagggcagaccgccg
tcgaacctgccgaacggcggcggcagcggccaggggcagcggcagatcttccggcccgag
aagatcgagatggaggtcaacaccaggcgaggggccatggggcacctggggatgcgtggc
gggaaactcggcgacgacttcgccgacttcctcgacaccttcctgggcggcctcggctga
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