Nonomuraea fuscirosea: OIE67_05665
Help
Entry
OIE67_05665 CDS
T09742
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
nfs
Nonomuraea fuscirosea
Pathway
nfs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OIE67_05665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfs03019
]
OIE67_05665
03009 Ribosome biogenesis [BR:
nfs03009
]
OIE67_05665
Enzymes [BR:
nfs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
OIE67_05665
Messenger RNA biogenesis [BR:
nfs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OIE67_05665
Ribosome biogenesis [BR:
nfs03009
]
Prokaryotic type
rRNA processing factors
OIE67_05665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
WSA58241
LinkDB
All DBs
Position
1267055..1269844
Genome browser
AA seq
929 aa
AA seq
DB search
MADAVGEAVGETAAEKPKRATRTRSTATTTRRRTTKKTAEAEAEAAASGALPEGEPVAEE
PVKRRRTRKKADEAVAPAAEADAGALAGEAGDEAGERDVRSGAPGRDEASSGVSAAAQAA
GAADGTEAGGQNGGAGESATGGRASRAGRSRRRAGAEAASEAAAEVAAGAVSGGDVEVSG
EKAAQGGADEADDDIMEILPEDEPLDDEPAGEDLDEDNVRPSLLADPFGMTARRQDEPGA
AFQRPAAIFAPLFQAPDPSKAKPAVTRKAEAPQPVAEPEAEEAEEPVDETPAEEETDLDT
SDEQDEEEGGSRRRRRRRGGRGRGKARERDDAEDGEESDEDDSDEQGEEAQEEEATSSRR
RRRRRRRGGDEGSEPAGDDPPNTVVRIRAPRSGRSASLDTATDGVQSVRGSTRLEAKKQR
RREGRELGRRRPPVITESEFLARRESVDRMMVVRRVGDRTQIAVLEDGVLVEHYVNREAS
QSYVGNVYLGKVQNVLPSMEAAFVDIGKGRNAVLYAGEVNFDTAGLEGQPKRIESALKSG
QSVLVQVTKDPIGHKGARLTSQISLPGRYLVYVPDGSMTGISRKLPDKERTRLKSILKKV
MPENAGVIVRTAAEGASEDELARDVARLSAQWENIRKKAKSASPPELLSAEPDLTIRVVR
DVFNEDFTNLVVQGDDAWETVDEYVKYVAPHLAERLSKWDDGEHGDVFASYRIDEQLSKA
MERKVWLPSGGSLVIDRTEAMTVVDVNTGKFTGQGGNLEETVTRNNLEAAEEIVRQLRLR
DIGGIIVIDFIDMVLESNRDLVLRRMLECLARDRTKHQVAEVTSLGLVQMTRKRVGQGLL
EAFSTPCDCCNGRGLLVSTEPVESKPEPRGTQGKMAVEKAVADKVSAAKDSASRDTVTGA
LEDVPAEDDQASQTSGRGRRRSRRAKSAD
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgccgtcggtgaggccgtcggtgagaccgcggccgagaagccgaagcgggcc
acgcggacgcggtccaccgccacgacgacgcggcggcgtacgacgaagaagacggccgaa
gctgaggctgaggcggctgcttcgggagcgctcccggagggtgagcccgtcgcagaggag
cccgtgaagcggcgcaggacccgcaagaaggcggatgaggcggtcgcgcccgccgccgag
gcggacgccggtgcgctcgccggtgaggccggtgacgaggcgggggagcgcgacgtgcgt
tccggcgcgcccggccgtgacgaggcgtcctccggtgtgagtgcggcggcgcaggccgcc
ggtgccgcggacggcacggaggcgggaggccagaacggcggcgcgggcgaaagcgctacc
ggcggacgtgcgagccgggccgggcgttcgcgccggcgggccggcgctgaggccgcttca
gaggcggctgccgaagtcgctgcgggagccgtttctggcggggacgtggaggtctccggt
gagaaggcggcgcagggcggggccgatgaggccgacgacgacatcatggagatcctgccc
gaggacgagccgctcgacgacgagcccgccggcgaggatctggacgaggacaacgtgcgc
cccagcctgctcgccgacccgttcgggatgaccgcccgcaggcaggacgagccgggagcc
gcgttccagcggccggccgccatcttcgcgccgctgttccaggcgcctgaccccagcaag
gccaagcccgccgtgacccgtaaggcagaggcgccgcagcccgtcgccgagcccgaggcc
gaggaggccgaggagccggtcgacgagacgccggccgaggaggagaccgacctcgacacc
tccgacgagcaggacgaggaagagggcggcagccgccgtcggcgccgccgcaggggcggc
aggggccgcggcaaggcgcgcgagcgggacgacgccgaggacggcgaggagtccgacgag
gacgactccgacgagcagggcgaagaggcgcaggaagaggaggccacctcctcgcgccgc
cggcgccgccgtcgccgcaggggcggtgacgagggctccgagcccgccggcgacgacccg
ccgaacacggtggtgcgcatccgcgcgccgcgctcgggccgttccgcctcgctcgacacc
gcgaccgacggcgtgcagagcgtgcgcggctcgacccggctcgaggcgaagaagcagcgc
cgccgcgagggtcgcgagctcggccgcaggcgcccgccggtcatcaccgagtcggagttc
ctggcccgccgcgagtccgtcgaccgcatgatggtcgtgcggcgcgtgggcgaccgtacg
cagatcgcggtgctggaggacggcgtgctcgtcgagcactacgtcaaccgcgaggccagc
cagtcctacgtcgggaacgtctatctcggcaaggtgcagaacgtgctgccctcgatggag
gcggcgttcgtcgacatcggcaagggcaggaacgccgtcctgtacgccggtgaggtgaac
ttcgacaccgccgggctggagggtcagccgaagcggatcgagtcggcgctcaagtcgggc
cagtcggtgctcgtgcaggtcacgaaggacccgatcggccacaagggcgcccgcctgacc
tcgcagatcagcctgccgggacgttacctggtctacgtgcccgacgggtcgatgaccggc
atcagccgcaagctgcccgacaaggaacgtacccggctgaagagcatcctgaagaaagtc
atgccggagaacgccggcgtgatcgtgcgcaccgcggccgagggcgcctccgaggacgag
ctggcccgcgacgtggcccggctgtcggcgcagtgggagaacatccggaagaaggccaag
tcggccagcccgccggagctgctgtccgccgagcccgacctgaccatccgggtcgtgcgc
gacgtgttcaacgaggacttcacgaacctggtcgtgcagggcgacgacgcctgggagacg
gtggacgagtacgtcaagtacgtcgcgccgcacctggccgagcgcctgtcgaagtgggac
gacggggagcacggcgacgtgttcgcctcctaccggatcgacgagcagctgagcaaggcg
atggagcgcaaggtgtggctgcccagcggcggctcgctggtgatcgaccgtaccgaggcg
atgaccgtcgtcgacgtcaacaccggcaagttcaccggccagggcggcaacctggaggag
accgtcaccaggaacaacctggaggcggccgaggagatcgtgcgccagctgcggctgcgc
gacatcggcggcatcatcgtcatcgacttcatcgacatggtgctggagtccaaccgcgac
ctggtgctgcggcggatgctggagtgcctggcccgcgacaggaccaagcaccaggtggcc
gaggtcacctcgctgggcctggtccagatgacgcgtaagcgggtcggtcaggggctgctg
gaggcgttctcgacgccgtgcgactgctgcaacgggcgcggcctgctcgtttccaccgag
ccggtggagagcaagccggagccgcgcggtacgcagggcaagatggcggtcgagaaggcg
gtggcggacaaggtttccgcggccaaggactccgccagccgtgataccgtgaccggtgcg
cttgaagacgtcccggccgaggacgaccaggcaagccagacttccggcagagggcggaga
cgctcccgccgagccaagtcggccgactaa
DBGET
integrated database retrieval system
